Cucumis sativus (cucumber): 101206696
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Entry
101206696 CDS
T02486
Name
(RefSeq) rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101206696
Enzymes [BR:
csv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101206696
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
101206696
NCBI-ProteinID:
XP_031742906
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Position
6:26531028..26534652
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AA seq
684 aa
AA seq
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MAALLFFFFGLALAMAVPPQQDSSQQILEENNNKAMLSRDVTLELQNHDWKILTFLFLNL
QVIIDNGIVRVTLSRPDGDVIALKYNGIDNLLEIRNVQSNRGYWDVVWNRPNKASATDRV
IATNFKVITSNSDQVELSFAKTWDPSDPSSLPSNIDKRYILRRGDSGFYSYGIFERLNGW
PQIEVDQIRIAYKLLGDKFHYMAISDNRQRMMPTAEDRLTGKPLDYPEAVLLTRPRDPSF
RGEVDDKYQYSLENMENKVHGWESSDPHVGFWMITPSDEFRTAGPVKQDLTSHVGPVTLS
MFVSTHYAGKDVSMRFQEGEAWKKVFGPVFTYINSDPTGTGKPGSLWDDAKNQMRIETSK
WPYNFVESTEFPSSEQRGSLSGQLLVRDGFAKYPQMWGDSAYVGLAAPGELGSWQRESKG
YQFWTRADDHGYFSIDNIRSGTYNLYAWVPGVLGDYKYDNQITITPRSSTNLNLLVFHPP
RQGPTLWEIGIPDRKAAEFYIPSPRPTLTNCFYNDSKLHIQDDNFRQYGLWERYAELYPH
GDLVYNVDTDDYHRNWFYAHVTRATGSGTYEATTWQIVFHIQRPKQIGNYMLRLALASST
DAVIDIRFNNPSTKQPHFTTGYWSSGKDNAIARHGIHGLHWLFNFQVPSQLLVEGQNVIY
LTQRRHTGEFQGVMYDYIRFEDVE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcttcttttcttcttcttcggtttagctcttgccatggccgtaccaccacaa
caagattcttcccaacaaattttggaggagaacaacaataaagcaatgttgtcacgcgac
gtaacgttagaactgcagaatcatgattggaaaattctaacttttttgtttttgaattta
caggtaataattgacaatggcatagttcgagtcactttatctcgtcctgatggcgatgtt
attgctttaaaatacaatggtattgacaacctccttgaaattcgcaacgtccaatctaac
agaggatattgggacgttgtttggaaccgcccaaataaagcaagtgccactgacagggta
atagcgacaaatttcaaagtaattacgagcaacagtgaccaagtagagctttcattcgcc
aaaacgtgggatccttccgacccttcttcgctcccttcgaacatagacaaaaggtatatt
ctgcgacgtggggattctgggttctactcatatggtatatttgaacgcctcaatggatgg
cctcaaattgaggttgatcaaattagaattgcctacaaactcctaggagacaaatttcat
tacatggcgatatcagacaatagacagagaatgatgccaactgcagaggaccgtcttact
gggaagcctttggattatccggaggcggttctattaacccgaccgagggatccaagcttt
agaggagaggtggacgataagtaccaatactcattagaaaatatggagaacaaggttcat
ggatgggagtcaagtgatccacacgtgggattctggatgatcacgcccagtgatgagttc
cgtacggctggtccggtcaagcaagatctcacttcccacgtcggccccgtaactctttct
atgtttgtgagtacacattatgcgggtaaagacgtttccatgagatttcaagagggagaa
gcttggaagaaggttttcggaccggttttcacttatattaactccgacccaaccggaact
ggtaaacccggttcactctgggacgatgctaaaaaccagatgaggattgaaacaagtaaa
tggccatacaactttgtcgaatccacagaatttccatcgtcagaacaaagaggaagcttg
agtggtcaattattagtccgagatggattcgctaagtacccacagatgtggggagattcc
gcttatgtgggccttgctgctcctggggaactagggtcttggcaaagagaaagcaaggga
tatcaattttggacacgagcggacgatcatggatacttctcaattgataacattagatcg
ggaacttacaatttatatgcttgggtacctggtgtccttggtgattacaagtatgataac
caaatcaccatcacaccaagaagttccactaatctaaatttgttggtctttcaccctcca
agacagggcccaactttgtgggagattggcatcccagatcggaaggcagctgagttctat
ataccaagtcctcgacctaccctcacgaattgcttttacaatgattccaagctccacatc
caagatgataattttcgacaatacggtctttgggaacgatacgccgaattgtatccacat
ggagatcttgtgtacaatgtcgacactgatgattaccatcgtaactggttctacgctcat
gtcacccgagctactggttctggtacctatgaggcaacaacgtggcaaattgtgtttcat
attcaaaggcctaaacagatcggtaactatatgcttcgattagccttggcctcctcaact
gatgctgtgatcgatatccgattcaacaacccttctaccaaacaacctcatttcacaacc
gggtattggtcatcaggaaaggataacgccattgccagacatggtattcatgggcttcat
tggttattcaacttccaggttccaagccaacttttggtagaaggtcaaaacgtgatctat
ctaacacaaagaagacatacaggagaatttcaaggagtaatgtacgactacatacggttc
gaagatgtagagtaa
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