Cucumis sativus (cucumber): 101206831
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Entry
101206831 CDS
T02486
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB2 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03022
Basal transcription factors
csv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101206831
09124 Replication and repair
03420 Nucleotide excision repair
101206831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101206831
03400 DNA repair and recombination proteins [BR:
csv03400
]
101206831
Transcription machinery [BR:
csv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101206831
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101206831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
101206831
NCBI-ProteinID:
XP_004134713
UniProt:
A0A0A0KK55
LinkDB
All DBs
Position
6:complement(29184987..29194216)
Genome browser
AA seq
451 aa
AA seq
DB search
MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA
KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL
AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS
QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE
AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFL
QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREW
NGLLWEDSKNLRLVVKADIHTHMREHLRRQK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagtaaagatcatagcgaagaattttatggacatggtggcctccttgcccgcc
atgaagctcgatcaactctatgagaatgcattcatctgcgaagccattctcaggtcactt
ccgccactggctaagaagtttgttttacaaatgttatacattgatggtccagtttcagcc
aagtccatggaggagtgggtgcttccagatggagtctcaaagtataaggttgctgttgat
cgattgattcaattgagagtatttattgagactgcagataggaaaagagaaacaacctac
cggctaaatccaactttccaagcaaacctccaaaagcttttaatacatggtgaagttcta
gccagagaacctatgccttctaatataaccgtgaggcttccaagtttggaagatcttgag
gcttatgctctggatcagtgggagtgcttcttgctgcaattgataaactcgggccaagca
gagaagccatcaaatattagttcttctgtgatgaaagttttccagaaaggccttttaagt
cagagggataaagaagctccacgattaactgagagtggtttccagttcttgttgatggaa
acaaatgcacaactttggtatatcatcagagaatatatatctaatgctgaggagcgaggt
gtggatcctgcagatttgatttcttttctgctagagcttagttttcatgtgacaggagag
gcttatgatattgatacactgtcagatgaacagaggtatgctatcaaggaccttgctgat
ctgggactagttaagcttcagcagggtagaaaagagagttggttcatacctactaaatta
gccacaaatctttcaatgagtttggcagattcctcttcgaggaaactgggatttgttgtt
gtggagacaaatttcaggatgtatgcttattctacttccaaactacattgtgaaatatta
cgtcttttttcaaggattgagtatcaacttccaaatcttatagttggagcaataacgaaa
gaaagcttgtataatgcttttaagaatgggattacagcagagcagatagttacttttcta
caacagaatgcacatcctcgtgttgcagagagaataccatcagtccctgaaaatgtcaca
gatcagattaggttatgggaatcagatcttaatagggttgatattactcccgcacatttt
tacgacgaatttccttccagggaagttttcgaggctgcttgcgactatgcacgggaatgg
aacgggttgctatgggaggattcaaaaaacttgcgactggtagtgaaggcagacatacac
acacatatgcgagaacatcttcggcgtcaaaagtag
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