Cucumis sativus (cucumber): 101206836
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Entry
101206836 CDS
T02486
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csv04121
]
101206836
Ubiquitin system [BR:
csv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101206836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_2nd
TPR_1
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
101206836
NCBI-ProteinID:
XP_011652572
UniProt:
A0A0A0LHL7
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Position
3:complement(39037134..39051788)
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AA seq
758 aa
AA seq
DB search
MEDFAFHDGNVCALLESRHINFRQDPAYGLQMHSSFIQRLSQEKELEGHQGCVNAVAWNS
RGSLLISGSDDTRINIWSYSGRKLLHSVDTGHSANIFCTKFVPEMSDDLVLSGAGDAEVR
LFNLSRLRGRGQDDNPIAPSALYRCHARRVKKLAVEIGNPNVVWSASEDGTLRQHDFREG
MSCPPDGASHQECHNVLLDLRCGAKRSLADPPRQTLALKSCDISSTRPHLLLVGGSDAFA
RLYDRRMLPPLSSSQKRMSPPPCVSYFCPMHLSDRVRSGLHLTHVTFSPNGEEILLSYSG
EHVYLMNVNHGGLGTMQYTSGDVSKLMSFTPVLNGFELQHHVSNLSNSFPLNCGGNAKLD
RSRKLLQIAEKCLEGGNYFGGIEACNEILDGNGRNIGVILKHDSLCTRAALLLKRKWKND
VHMAIRDCYSARKIDHSSFRAHYYMCEALSQLGRHKEALDFAFAAQCLAPSNSEVAEKVE
SIKRDLAAAELEKSNKGNDGALKSAPLGGVLSLSDFLYRSDANSDVSQDGLRSEREDSDY
DEEVELDFETLSGDESHDVDSNVLHGSLNLRIHRRIDPSRERVGPNGSCGSPSSSQNDAT
LYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQKGEYVASGSDDGRWFIWEKETGRLIKIL
VGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTAPVPSVVAGGAVGPQEADVLAVIENN
QRRLCRNREAILPFEILERFRMHDFSEGSLHPFECAQS
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaggacttcgcctttcacgatggcaacgtatgcgctttgcttgagagcaggcacatc
aactttcgtcaagatcccgcctatggtttgcagatgcactcatcattcatccaaagactc
tcccaggaaaaggaactggaggggcaccaggggtgtgttaatgcagtggcctggaattct
cgtggttcgcttttgatatctggatcagatgacactcgaataaacatctggagctattct
ggtcgaaaactattgcactctgtggatactgggcattctgcaaacatattttgcacaaaa
tttgttcctgaaatgtctgatgatcttgtgctctcgggagctggggatgcagaggtgagg
ttgtttaatttatctcgcttaagagggagaggacaagatgataatcccatagccccatca
gctttgtatcgctgtcacgccagaagagtaaaaaaattagctgttgaaatagggaatcca
aatgtagtatggagtgctagtgaggacggaactcttagacagcatgactttcgagagggc
atgtcttgtcctcctgatggagcttctcaccaagaatgccacaatgttcttcttgatttg
cggtgtggagcaaagaggtcattggctgatcctccccgacaaacccttgctttgaaatcc
tgtgatattagttccactaggcctcatttacttctggttggtggaagtgatgcatttgca
cggttatatgatagaaggatgctgccacccttatcttccagccagaagaggatgtcgcca
cctccttgcgttagctacttctgtccaatgcatctatctgatcgggttcgttcgggtttg
catttgactcatgttacttttagtccgaatggagaagagatcctgcttagctatagtgga
gaacatgtatacttgatgaatgtaaatcatggtggactaggaacaatgcagtatacatca
ggagatgtttctaagttaatgagcttcactcctgtactcaatggattcgaattgcaacat
catgtttccaatctatctaatagttttcctttaaattgtggtggtaatgcaaagcttgat
agaagcagaaaattattacaaattgctgaaaaatgcttggagggtgggaactactttggt
ggaattgaagcatgcaatgaaattttggatggaaatggtcgtaatattggtgttattctt
aagcacgattcattatgcactcgtgctgctttactactcaagcggaagtggaagaatgat
gttcatatggccataagagattgttacagtgctaggaaaatagatcattcctctttcaga
gcacattactacatgtgcgaagctctatcacagttgggtagacataaggaagctctagat
tttgcatttgctgctcagtgtttagccccgtctaattctgaagtcgcagagaaggtggaa
agtataaagagggacctcgcagcagctgaattggaaaaatcaaataaaggcaatgatgga
gctctaaaatcagcaccattaggtggtgtattatcattaagtgactttctttatcgctca
gatgcgaatagtgatgtttcacaagacgggctgagatcagaaagagaagattctgattat
gatgaggaggtggagctggacttcgaaaccttatcaggtgatgaatcccatgatgttgat
tccaacgttctacatggaagtttaaatcttagaatacatagacgtattgatccatcaaga
gagcgggttggtccaaatggctcctgtgggtctccttcatcatcacaaaatgatgcaaca
ctttatcagcctgaacctgtgattgatatgaaacaaagatatgttggtcattgtaatatc
ggaactgatattaaacaagccagttttctcgggcaaaaaggtgaatatgttgccagtggt
agtgatgatggtagatggtttatttgggaaaaggaaactggtaggctgattaaaatactt
gttggagatggagctgttgtgaattgcgtgcaaagtcatccatttgattgtgcaattgct
acgagtgggatcgacaataccataaagctatggactccaactgctccggttccatcagtc
gtagccggtggagcggttgggcctcaggaagccgacgtgttggctgtaatagagaacaat
caacgcagactttgccgtaatagagaagccatactgccttttgaaattttggagcggttt
aggatgcatgatttctcagaaggaagccttcatccatttgaatgtgctcagagttga
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