Cucumis sativus (cucumber): 101206856
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Entry
101206856 CDS
T02486
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101206856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101206856
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
101206856
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
101206856
NCBI-ProteinID:
XP_004141062
UniProt:
A0A0A0LIM0
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Position
2:309811..312757
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AA seq
217 aa
AA seq
DB search
MGDDGRLHAIDDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAA
HGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANG
ASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLK
LIAVPLCQIHENHKTYGPIISGIPQLLSKFSFNIIGT
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgacggacgtctgcatgctattgacgacgacgatgcttcttccgcccaccag
ctctcttacatcgatatctaccctctcagcaactactactttggatccaaagagcctctt
cttttcaaggatgagaccttgtctgatcgtgtcctcaggatgaaatccaattatgctgct
cacggattgaggacttgcgtcgaagcagttatgctggttgaactattcaagcatcctcat
ttgttgctgtttcaaatacgtaattcaattttcaagcttcctggtggtcgcataaggccc
aatgaatcagatattgatggcttgacacgaaagttgacgaagaagctttctgccaacgga
gcctctgatgcatctcattgggaggttagtgagtgcctcggtatgtggtggaggcctgac
tttgagaccttgctcttcccgtatttgtccactaatgttaaaggggccaaggagtgcact
aaacttttcttggtcaagttgccggagagtagaaaatttgttgtgccaaagaacctcaag
ttgatcgcagttcctttatgccaaattcacgaaaaccataagacatatggaccaattata
tcgggcattccgcagcttctttccaagttctccttcaacatcatcggaacctaa
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