Cucumis sativus (cucumber): 101206935
Help
Entry
101206935 CDS
T02486
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csv03041
]
101206935
03036 Chromosome and associated proteins [BR:
csv03036
]
101206935
Spliceosome [BR:
csv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101206935
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
101206935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
TPR_15
Lsm_interact
ARM_TT21_5th
NumbF
MOSP_C
Motif
Other DBs
NCBI-GeneID:
101206935
NCBI-ProteinID:
XP_004142811
LinkDB
All DBs
Position
5:complement(22483225..22520334)
Genome browser
AA seq
828 aa
AA seq
DB search
MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL
QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST
GPEALAAIERLYERGVFDYLSVSFWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQAKEKQVQLIRSIFHRQLSLPLSNMSSTL
EAYKAWEMEVKQECALDTESNYSDGVPTQVATTYQRALDMYNARVQLEDQISKQDLTDTE
RLHQYIIYLKFEQSAGDPARVQVLFERAIADFPVSVDLWLDYTCYMDKTLKVGNIVRNVY
SRATRNCPWIGDLWVRYLLALERSHASEGEIASVFGKSLQCSFSTLDEYLDLFLTRIDGL
RRRISSGVQLEDALEYSLIRETFQRASDYLSPHLKNSEVLVRLYAYWARLEINMGKNLDS
ARGVWESLLKICGSLSAAWEGYIAMEVELNHINNARSIYKRCYSKRFPGSGSEDICHSWL
RFEREFGSLEDFDHAVRKVNPRLEELKSYKLQIDDSENPVKQNDRSKRKLGGDAPNVESP
AKKLKDSAHGPKKVTEKGKAQLENVDDQTGDIRGRVKKLDDISDQQMNDSIQEKGKVYND
QCTAFISNLNLKVTYDHLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHLEAGV
AKNKQLLLGKKISIARSDPKKGGHGTDKAGAGKRFESRSSKESHKGNEQPSGVRRHGGNS
VDLKGKNTFAVPRNVRALGWTTDKPKTLEQDDEKPKTNDEFRKLYFKG
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacccatttcatccaaagccgaaactccacttccaactaactcagaccaagga
tactcggtaaatggagacgaacccatgcccgaccttcctcagaaccccgccgattcttct
tcctccgactctgattctgaagacgacgaatccaaccaaaaccttcacctccagtccctt
caatctcagctctcctccaatccctccgactacgatgctcacgttcaatacataaagatt
ttgaggaaagttggtgacatcgacaacctcaggaaagcaagggaagcaatgagtgagata
tttccattgaccccttcaatgtggcaggaatgggccgaggacgaagcatctattagtact
ggacctgaggctcttgctgcaattgagagactatatgagcgaggggtgtttgattatctg
tcagtttctttttggcttgactacttaaatttcattcgagaatatgatccattggtgcaa
gattgtgcaacttctggaattaaaaaggttagagatttatttgaacgtgctctcacagcc
gctggtttgcatttcactgaggctgaaaaattatgggaagcatatagagatttggagaaa
tccatatatcaaaccattgctgaaactgatgctcaggcaaaggaaaaacaagtccagcta
atccgaagcattttccatcgtcagctgtcacttcctctatctaatatgagttcaacactt
gaggcctataaagcatgggagatggaagtgaaacaagaatgcgctcttgatacggaatct
aattattctgatggggttcccactcaagtggccacaacttatcaaagagcattggatatg
tataatgcccgtgttcaactggaagaccaaatatcgaaacaggatttaactgatactgaa
agacttcaccagtacatcatttatctaaaatttgaacaatctgctggagatccagcaagg
gtccaagttctgtttgagcgtgcaattgccgattttccagtatcggttgatctttggcta
gattatacctgttacatggacaaaactttgaaggtgggcaatattgtgaggaacgtttac
tccagggcgactaggaattgtccatggataggtgatctttgggttcgatatttgcttgct
ctggaacgttctcatgcttctgaaggtgaaattgcttcagtctttgggaagtctttgcag
tgctcattctcaaccttggatgagtacttggatttgtttcttacacgaattgatggcttg
aggcgaagaatctcatctggagttcagctagaggatgcattggaatattcattgattaga
gagacctttcagcgtgcatcagattacttatcaccacatctaaagaattcagaagttttg
gtgcgtttgtatgcttattgggcccgtttggagataaacatggggaaaaatctagattct
gcccgtggagtttgggaaagtttgcttaagatctgtggctcattatcggcagcatgggag
ggttatatagcaatggaagttgagttgaaccatataaataatgccagatccatatataag
agatgttacagcaaaagatttccagggagtggttcagaggatatttgccattcctggttg
cgtttcgagagagaatttggtagccttgaagattttgaccatgctgttcgaaaggttaac
cctcgcctggaagagttgaagtcatataagttacagattgatgactcagaaaatcctgta
aagcagaatgatcgtagtaagcgaaaattgggtggagatgcacccaatgtagagtctcct
gctaagaaactgaaagattctgcccatgggccgaagaaggttactgagaagggtaaagct
caattagaaaacgtagatgatcaaaccggagacatcagaggaagagttaaaaaacttgac
gacataagtgaccaacaaatgaatgattccattcaagaaaagggaaaagtatataatgac
caatgcactgcattcatctccaacctcaatctcaaggttacctatgaccacttacgggac
ttcttccaagatgttggtggagtagttgcaattcgaatattgcacgataagtttactgga
aaatcacggggactagcatacgttgatttctctgatgatgcacatcttgaggctggagtt
gcaaaaaacaagcagttgttgcttgggaaaaagataagcattgcacggtcagatcctaag
aaaggaggccatggtacggataaagctggtgcaggcaagagatttgagtcgagaagttca
aaggagtctcataaaggcaatgagcaaccatctggggtgaggagacatggagggaacagt
gttgatctcaagggaaagaacacgtttgcggtgcctagaaatgttagagcacttggttgg
actacagataaacctaaaaccttggaacaagatgatgagaagccaaaaaccaatgatgaa
ttcaggaaactgtattttaaaggctga
DBGET
integrated database retrieval system
