Cucumis sativus (cucumber): 101207244
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Entry
101207244 CDS
T02486
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101207244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101207244
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101207244
mRNA degradation factors
5'-3' decay
Lsm complex
101207244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
101207244
NCBI-ProteinID:
XP_004141715
UniProt:
A0A0A0KAS4
LinkDB
All DBs
Position
7:complement(21666029..21668534)
Genome browser
AA seq
128 aa
AA seq
DB search
MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDL
YSDIPLGLYVIRGENVVLLGELDLEKEELPPHMTHVSAVEIKRAQKAEREATDLKGTIRK
RLEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaagcgcggaagatatctacctttcaacttctcttgccaattaccttgac
aagaaggttcttgtactacttcgagatgggcggaagctattagggatactccgttcattt
gatcaatttgctaatgctgttcttgaagggtcatgtgaaagggtgatcgttggtgacctt
tacagcgatattcctttaggtctctatgttattcgaggggaaaacgttgttttacttggc
gagctggatttggagaaggaggagctccctccacacatgactcatgtctctgctgtggag
attaaaagggctcaaaaagcagagagagaagctacagatcttaaaggcacaattaggaaa
agattggaattccttgatctggattga
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