KEGG   Cucumis sativus (cucumber): 101207335
Entry
101207335         CDS       T02486                                 
Name
(RefSeq) SART-1 family protein DOT2
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101207335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csv03041]
    101207335
   04121 Ubiquitin system [BR:csv04121]
    101207335
Spliceosome [BR:csv03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    101207335
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    101207335
Ubiquitin system [BR:csv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101207335
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 101207335
NCBI-ProteinID: XP_011656109
UniProt: A0A0A0KXY6
LinkDB
Position
5:31685986..31694874
AA seq 939 aa
MDWERSSAPDERSGDDFGYSGAEKSSKHRSEDHRKSSRGEEKDHRSKDRERSKRSSDDAS
KEKEKEAKDSERDRIRSREKRKEDRDEHEKERSRGKVKDKDYDRDIYKDKEYERERDRKD
RGKDRERERERELEKDTVRGHDKERGKEKDRDRDKDRDRDRKKKDKDKDRSNEIEREKGR
DKHRDQEDKESYRNIDKDRGKERILEDDRKTDQNKQKLQDKEGIGSKNDEERIGRIGDEG
KDYMLESDGENNRDRDVNQGNMVQHLGVEENFDGLKVGSHASSTMLEERIRNMKEDRLKK
QTEESEVLSWVKRSRKLEEKKLSEKEKALQLSKIFEEQDNIDQGVSDDDIAPEDTTNNHD
LAGVKVLHGVDKVLEGGAVVLTLKDQSILADGNVNEELDVLENVEIGEQKQRDIAYKAAK
KKTGIYDDKFNDENYGEKKMLPQYDDPADADEGLTLDGRGGFNNDAEKKLEELRRRLQGA
SSVKHFEDLNVSTKVSHDYYTQDEMLKFKKPRKKKSLRKKEKLDIDALEAEAISAGLGVG
DLGSRNDSRRQAKKEEQEKSEAEMRLNAYQSAYAKADEASRSLQLVQNSSARLEDNDDAL
IADDDEDFYKSLERARKLALKKQDAASGPGAVALLATATTSSQATDDQSTKAGELQENKV
VFTEMEEFVWGLQLDEDAHKPEEDDVFMDDDEIPKEEYHEDVKDKDGGWTEVKDTAMEES
TPEENEAVAPDETIHEVPVGKGLSSALKLLKDRGTLKESIEWGGRNMDKRKSKLVGIVDE
DEPKESKSKDSRLSSLVDYKKEIHIERTDEFGRIMTPKESFRQLSHKFHGKGPGKMKQEK
RMKQYQEELKLKQMKNADTPSLSVERMREAQAQLKTPYLVLSGHVKPGQTSDPRSGFATV
EKDLPGGLTPMLGDRKVEHFLGIKRKGEASNTGTKKAKV
NT seq 2820 nt   +upstreamnt  +downstreamnt
atggattgggaacggtcatccgcacctgatgagagaagtggcgatgactttggttatagt
ggagcagaaaagtcaagtaaacatcggagtgaggatcatcgaaagagtagtcgaggggag
gaaaaagaccatagaagtaaagatcgagaacgatctaagagatctagtgatgatgcatcg
aaagaaaaggagaaagaggcaaaagattcagaaagggatcggattcgtagtcgggaaaaa
aggaaggaagacagagatgagcatgaaaaagaaaggagcaggggcaaagttaaggacaaa
gattatgacagagatatttacaaggataaagaatatgagagagagagagatagaaaagat
cgaggaaaggatagagagcgtgagagggaaagagagctggagaaggatactgttcgagga
catgacaaagagaggggaaaggagaaagacagggacagggacaaagacagggatagggat
aggaagaagaaggacaaggacaaggaccgatcaaatgaaattgaaagggagaagggaaga
gataaacacagagaccaagaggacaaggaaagctataggaacattgacaaggacagggga
aaagagagaattttggaagatgataggaaaacagatcaaaacaagcagaaattacaagat
aaagaaggaattggcagcaaaaatgacgaggaaagaattggtcggattggagatgagggt
aaggattatatgctagaaagtgatggtgagaataacagggacagagatgttaaccaaggt
aacatggtccagcatttgggagttgaagaaaattttgatgggttgaaagttggaagtcat
gcttcttcgactatgcttgaggagcgcattcggaacatgaaagaagacaggttaaagaag
caaactgaagaatctgaggttttatcatgggttaaaaggagtcgtaaacttgaggagaag
aaactttctgaaaaagagaaagccttacagctttcaaagatttttgaggaacaagacaat
atagatcaaggtgtaagcgatgatgatattgcaccagaagatacaactaataatcatgat
ctagctggagttaaagtactccatggcgtagacaaagtactagaaggtggtgcagttgtc
ttaaccctcaaggatcagagtatcttagctgatggcaatgttaatgaagagttagatgtg
cttgagaatgtggaaattggagaacagaagcagagagacatagcctataaagcagcaaaa
aagaaaacagggatttatgatgacaagtttaatgatgaaaattatggtgagaagaagatg
cttccacagtatgatgatccagcagatgcagatgagggcctaaccctagatggaagaggg
ggttttaataatgatgcagaaaagaagcttgaggagcttcggagaagattacagggagct
tcgtcagttaagcactttgaagatcttaatgtatcaacgaaagtctcacatgattattac
actcaagatgagatgcttaaatttaagaagcccagaaaaaagaaatcccttcgtaagaaa
gaaaagctggatattgatgcccttgaagcggaagcgatttctgctggattgggtgttgga
gaccttggttctcgaaatgattctagaaggcaagcgaaaaaagaggaacaagagaaatct
gaggcagaaatgcgacttaatgcataccagtcagcctatgctaaagcagatgaggcatca
agatctctacaattagttcaaaatagctctgccagattagaggacaacgatgatgctctc
attgcagatgatgatgaagatttctacaagtcattggagagagcaagaaaattagctctt
aagaaacaggatgcagcatccggaccaggagcagttgctcttcttgctacggcaacaact
agcagtcaggcaactgatgatcaaagcacaaaagctggagagttgcaggaaaataaggtt
gtatttacagaaatggaagaatttgtctggggtctccagcttgatgaagatgctcataaa
ccagaggaagatgatgtctttatggatgatgatgaaataccaaaagaagaatatcatgaa
gatgttaaggataaagatggtggatggaccgaagtcaaagatactgccatggaagaatcc
actcctgaggaaaacgaggcagttgctccagatgaaacaatccacgaagttcctgttgga
aagggattatccagtgcactgaagctgcttaaagaccgaggaactctgaaagaaagcatt
gaatggggcggcagaaacatggacaagagaaagagcaaacttgttggtatagttgatgaa
gatgaaccaaaggaatctaagtcaaaggattctcgtttatcttctttggtggattacaaa
aaggagatccacattgagaggactgatgaatttggaagaattatgactccaaaggagtca
tttcgtcaactctctcacaagttccatgggaagggacctggaaaaatgaagcaagaaaag
cgcatgaaacaataccaagaagagttaaagttgaagcagatgaaaaatgctgatactcct
tccttatcagtggagagaatgagggaagctcaagcacaactaaagaccccttatcttgtc
ctcagcggccacgttaaacctggccaaacaagcgatccaagaagtggttttgctacagtt
gaaaaggatctcccaggtggcttgacacccatgcttggtgacagaaaagttgaacatttc
ttggggataaagcgtaaaggggaagcttcaaatacaggcacaaagaaagcaaaagtttga

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