Cucumis sativus (cucumber): 101207397
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Entry
101207397 CDS
T02486
Name
(RefSeq) serine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101207397
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csv01007
]
101207397
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csv03016
]
101207397
Enzymes [BR:
csv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
101207397
Amino acid related enzymes [BR:
csv01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
101207397
Transfer RNA biogenesis [BR:
csv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101207397
Prokaryotic type
101207397
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
RBSN_mid
DUF3490
Motif
Other DBs
NCBI-GeneID:
101207397
NCBI-ProteinID:
XP_004136430
UniProt:
A0A0A0LHK3
LinkDB
All DBs
Position
3
Genome browser
AA seq
544 aa
AA seq
DB search
MKIMIMGERGAIRHFHSFPPSHTFPKASTMGFQTLKLPAFPASSTSRLMVLPPTKTPSLT
SLHPCVRTHRPPSRLLVRAFSLPSVEFDHPPSTIAGEEKVVKPQWKASIDFKWIRDNKDL
VASNIQNRKSGANLELVLQLYDKMLNLQKEVEQLRAERNMVANKMKGKLEPSERQKLIEE
GKNLKEGLVSLEENLLKLTDQLQQEAQCIPNTTHPDVPIGGEDCSIIRKMVGSPREFSFP
VKDHLELGKQLDIFDFDAAAEVSGSKFYYLKNAAVTLELGLINWTLSEVMKRGFTPLITP
EIVRSTVVEKCGFQPRGENTQVYSIEGSDQCLIGTAEIPVGGIHMDSILSESSLPLKYVA
YSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESESYHEELIRIEEDLFSSLGLH
FKTLDMASADLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQEQVPS
TLKKGKGNLAPTQFVHTLNATACAVPRMMVCLLENYQQEDGSVIIPEPLRPFMGGLDRIS
PASA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaagataatgataatgggggaaaggggtgccatccgccatttccattccttcccgcca
agccataccttccccaaagcttcaacaatgggattccaaacccttaagctacctgccttt
ccagcctcttccacttcccgtctaatggtactgcctcccactaaaaccccttctcttact
tctcttcatccttgtgtccgtacccacagacctccatctcgattactcgttcgggctttc
tcattgccgtccgtcgaattcgaccaccctccctctacaatcgccggagaagaaaaggtt
gtgaaacctcaatggaaagcttcaatagacttcaagtggattagggataacaaggatttg
gtggcttcaaatatacagaatcggaaatctggtgctaatttggaacttgtgcttcagctt
tatgacaaaatgttaaatcttcagaaggaagttgagcagcttcgtgctgagaggaatatg
gttgcaaacaagatgaaagggaagctggaaccatccgagcgtcaaaaactcatagaggaa
ggaaagaatctaaaggaaggattggtttctttggaagaaaatcttcttaaactaacagat
cagcttcaacaagaagcacaatgtataccaaacacgacccatccggatgttcctatcgga
ggggaggactgctcgataataagaaagatggttggtagcccgagggagttcagttttcct
gttaaagatcatcttgaacttgggaagcaactggacatttttgactttgatgctgctgct
gaggttagtggatctaagttctactacctgaaaaatgcggcagtaacattagaattgggt
ctgatcaactggacactctctgaagttatgaagagaggctttactcctttaataaccccg
gaaattgttaggtccacagtcgttgaaaagtgtggattccaacctcgtggtgaaaatact
caggtttattccattgagggaagtgaccaatgcctcattggtactgcagagattcctgta
ggagggattcacatggactccatcctttctgagtcttcattacctttgaagtatgttgct
tattctcattgctttcgtactgaggcaggtgctgctggagcggcaacaagaggcctgtat
cgagttcaccagttcagcaaggtagaaatgtttatattttgccgtcctgaagagagtgag
tcttaccatgaagaactcataaggattgaagaggacctgttctcatcactaggattgcat
ttcaagaccttggatatggcctcagcagatttaggtgcacctgcttatcgaaaatttgat
gtggaggcatggatgccaggtttgggacgatatggcgagatatcaagtgcatcgaattgt
acagactatcaaagccgtagattaggaatccgatatcgtccccaagaacaggtaccatca
actttgaagaagggcaaaggcaatctagcgccaacacaatttgttcacacgttgaatgca
acagcatgtgctgtgcctcgaatgatggtttgcttgcttgaaaattatcagcaggaagat
gggtctgttattattcctgagccattgaggcctttcatgggtggtcttgaccgcatttct
cccgcatctgcatag
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