Cucumis sativus (cucumber): 101207535
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Entry
101207535 CDS
T02486
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101207535
Enzymes [BR:
csv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101207535
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101207535
NCBI-ProteinID:
XP_004150371
UniProt:
A0A0A0LK67
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Position
2:16050238..16054649
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AA seq
489 aa
AA seq
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MFATTGVLFFIWFLSCTLLPLTMATFNFNLTVPNLLPDPETVAYQVQRSVNDSFFRRQML
SIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS
DPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC
ITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL
SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKLVQ
RMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEVTKRVDTNAG
DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSLPPKSAALVDQLTLNAGVFGGSRE
NRQSTSYPGDEASSSSSGSSGSDGGGDYFGMIFGGGGINNAPPPSLSAVNMIILTLFTVY
DALLLTLSL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctactactggagttctcttcttcatctggtttctgagctgcactctgcttcct
cttaccatggcaactttcaacttcaatctcactgtgccaaatcttctaccagatcctgag
actgttgcttatcaagttcaaaggagtgtgaatgattcctttttcagaagacaaatgttg
tccattcattcaaaaggacaatccaattcctgtcaaactgcaaaccctatcgacgattgt
tggcgttgtgactcaaactggcaagctaatcgccaacgactcgccgattgcggcattgga
ttcggccgagatgccatgggagggaaaggaggtcagatctacgtagttacagattcctcc
gatcccgaccctgtaaaccctcgacctggaactctccgttacgccgtggttcaagatgaa
cctctttggatcgtctttgctgcagatatgacaatcaaactcaaatacgaactcatgatg
aacagttacaaaaccctagatggccgaggcgccaatgtccacattaccggcggcggttgc
atcacactccaatacatctcgaatgtaatcatccacaacatcaacatccaccactgtgtc
cctaccggtcacaccaacatccgatcgtcccctacgcatgtcggatacagaggaaagtcc
gacggcgatggaatatcgatctttagctcacgcaacatctggatcgaccattgttctctc
tcgtactgtaccgatggcttaatcgacgccataatgggatcgacgggaatcacgatctcg
aacaactacttctcccaccacgatgaggtgatgttgttagggcacgacgatgggttcacg
ccggattcagggatgcaggtgacaatagcttttaatttgttcggggagaagctggttcag
agaatgccgcggtgccgacggggatacattcacgttgtaaacaacgatttccaatcgtgg
gagatgtacgccatcggcgggagtggtaatccgacgatcaacagccaagggaatcggtat
attgctccaggaaatcccaatgcgaaggaggtgacgaagcgcgtggacacgaacgcggga
gattggtcggagtggaactggaggacggagggggacataatggtaaacggagcgtttttt
gtgccttccggcgaaggactcagcaatatgtacgttaaagcttccagtttgccgcccaaa
tccgccgctcttgtcgaccagctcactctcaacgccggcgtcttcggtggctccagggag
aacagacagagcacctcgtaccctggagacgaagcctcctccagcagctcaggatccagt
ggcagcgatggtggtggtgactactttgggatgatattcggcgggggtgggataaacaat
gcaccaccgccatctctttcagctgttaacatgatcattctaaccctatttactgtctac
gatgccttattattaacattgtcattgtag
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