Cucumis sativus (cucumber): 101207583
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Entry
101207583 CDS
T02486
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03030
DNA replication
csv03420
Nucleotide excision repair
csv03430
Mismatch repair
csv03440
Homologous recombination
csv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101207583
03420 Nucleotide excision repair
101207583
03430 Mismatch repair
101207583
03440 Homologous recombination
101207583
03460 Fanconi anemia pathway
101207583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csv03000
]
101207583
03032 DNA replication proteins [BR:
csv03032
]
101207583
03400 DNA repair and recombination proteins [BR:
csv03400
]
101207583
Transcription factors [BR:
csv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101207583
DNA replication proteins [BR:
csv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
101207583
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
101207583
MMR (mismatch excision repair)
101207583
DSBR (double strand breaks repair)
HR (homologous recombination)
101207583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
RADX
ASNSD1-SEP
zf-like
Motif
Other DBs
NCBI-GeneID:
101207583
NCBI-ProteinID:
XP_011648589
UniProt:
A0A0A0LKL9
LinkDB
All DBs
Position
2:279980..285332
Genome browser
AA seq
646 aa
AA seq
DB search
MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND
VVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA
TPSVNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP
IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVELCPDEDDTIPRQQFSFKP
ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC
NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG
GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY
TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
TGEEILGVSAKELYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQRVKNTVV
KADRVNYSSESKYMLDLLSKFSRLNKDCLGGLWAHQEDKAKVIQTK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcatctcacgcccaatgcaatctctgctattgtcgctggcgacgttaattcc
aagcctctggtgcaggttctggatatcaagctgatcggtaacgcgcaggagaggtacagc
ctcttgatatccgatgctgtttctgctgagcaggctatgctcgccactcagcttaatgat
gttgttaagactggacgagtcaagaaaggatccgttatccagttgatcgactatgtctgc
agtcccatcaagaaccgcaagattattgttgtactctgcctggaaactattatattggat
tgtgagataattgggaatccaaaatcatctgctcaatcagagaattttgcacaaaaggca
acaccatctgtaaatttagagcaacctgccaaggttggtaatggtcatttgagtgccaga
aatccagttcataatgtgcaaagcttccaagctacagttcaacctccatatcagccacct
ccaaattataaaaatcatggtgcaatcattaagaacgaggcaccagctcgtataattccc
atagctgcattgaatccttatcagggacgatgggctataaaggcaagagttactgcaaag
ggtgatctccgtcgctataacaatgccaaaggagatggaaaagttttctcttttgacctc
cttgattctgatggaggagagatacgtgtgacctgttttaatgctgttgtggatcgtttc
tacgaggtcatagaagttggtaaagtttacttgatttctaaaggtagcctgaaacctgca
cggaaggatttcaatcatctaaagaatgaatgggaggttttcttggaggcatcttccact
gtggaactgtgcccagatgaagatgataccataccaagacaacagttttcttttaaacct
atcagtgaaatcgagaatgctgaaaccaactctattctggatgttattgggattgtaaca
tctatcaatccatcaatccctgttttgagaaaaaatggtatggaaactcaaagaagagtt
gtgtatttgaaggatgcgtctggcaggagtgttgagctaacaatgtggggggatttttgc
aacaaggaaggccaaaaattgcaagaaataatttactcaggcctttctccagttttagct
gtgaaatccgggaaggtgagtgatttcactgggaaatccattgggacaatttcttctact
cagcttttcataaatcccgatcttcctgaggctcacatcttgagggagtggtacgatggt
gggggaaagaatactacttctctatctatttctaaagaaattgtaccaggatctgccaag
aatgatattcggaagactgtgtctcagattaaagatgaaggacttggcagagctgacaag
ccagattggataacagtgaaagcaacaatatcgtttatcaaaacagattctttctgctac
acagcatgcccgttaatgattggagatcgacaatgcaacaagaaggtgactagatcagga
aactcgaagtgggtgtgtgacaggtgcaatcaagaatttgaggattgcgactacaggtat
cttcttcaagcccaaatccaagaccatactggattgacatgggtgacggccttccaggaa
actggtgaagagattctgggtgtctcagccaaggaattgtacatgttgaagtatgaagag
caggatgatgtcaagtttggtgaaatcatcagaagtaaaatcttcgatcaatttctgttt
aggctcaaaattaaggaggaggtgtatggcgatgaacagagagtgaaaaatactgtagtc
aaggcagatagggtaaactattcttcagaaagcaaatatatgttggatttgctttccaaa
ttttcgaggttgaataaagactgccttggaggactttgggcacatcaagaagacaaagca
aaagtgatccaaaccaaatga
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