Cucumis sativus (cucumber): 101207714
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Entry
101207714 CDS
T02486
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csv03036
]
101207714
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
101207714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PHD
PDS5
PHD_2
Motif
Other DBs
NCBI-GeneID:
101207714
NCBI-ProteinID:
XP_011653342
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All DBs
Position
4:6218742..6241966
Genome browser
AA seq
1816 aa
AA seq
DB search
MSLPLSASASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLSDHPDAT
YATSTSDLLPHSRKIADLLLATDVSYLNLREDAKVLQEGPVEPFELYEEVLRHDGDAFSY
TAPGPIMDHVSSSTAPDRKVFEQRLPIRNQVEGDSRTTQSHKTEPETMPTNDTQISSSRK
VKTKKKGRDETSSGRTDSSELQDNTLANTCEFLEDFCGRAEIVDDDRDESEWLALPLTDL
RMLVNEIMSIRSKKLLHLVPLDMLTRLLKVLDNQIHRAEGLSVEECEHSDSDAVAAIFCA
LESIHASLAIMAHDQMPKLLYKEEIIERILEFSRRHIMDIMCAYDPSYRALHKVSENGAF
EVIEDEEDGDYGSSTKKRRAVKTTKIRKPALNKVSNAVNTILQKMCTILGLLKDLLLIER
LPDSCILQLVKTSFSTFLVDNIQLLQLKAIGLICGIFYSYTQHRNYLIDELVQMLFKLPS
TKRALRAYHLPEEEQRQIQMITALLIQLVHYSANLPEALRQASDSHSIFEVSVDSSCPTK
CHEAATEACCLFWTRVLQRFANVKTQDASEVKVMMENMVLDLLTTLNLPEYPASAPILEV
LCVLLLQNAGLKSKDISARSMAIDFLGMIAARLKRDAVISATDKFWILQELGNKEDVADQ
SYPKDVCSICLDGRVEKCILVCQGCQRLFHADCMGGTGRENEIPNRGWFCQICHCRKQLQ
VLQSYCKSQCKNDSEKRKDWSDKGSNASWLVSNIEIVQQLLLNYLQEVGSTDDLHLFVRW
FYLCLWYKDDPKSEQKFIYYLSRLKSMAIVRDGGNTSSLLTRDSVKKITLALGQNNSFSR
GFDKILHMLLASLRENSPVIRAKALRAVSIIVEADPEVLGDKRVQLAVEGRFCDSAISVR
EAALELVGRHIASHPDLGFKYFEKISERVKDTGVSVRKRAIKIIRDMCTSNANFAEFTRA
CIEIISRVGDDESSIQDLVCKTFYEFWFEEPSSSQTQFFGDDSSVPLEIAKKTEQIVEIL
RKMPNHQLLVTIIKRNLALDFFPQSTKAVGINPVSLTSVRKRCELMCKCLLERILQVEER
SNMDTEVRALPYVLVLHAFCVVDPMLCAPASNPSQFVVTLQPYLKSQVDNRVVAHLLESI
IFIIDAVLPLLRKLSPNVAEDLEQDLKQMIVRHSFLTVVHACIKCLCSLSKIAGKGAWVV
EYLIQMFFKRLDSQGVDNKQLVGRSLFCLGLLIRYGSPLLSNSSNKNVDITKSLSLLKMY
LQTEDLVIRVRALQALGFVLIARPEFMLEEDVGKIVEESLSSGSDVRLKMQALQNMYDYL
LDAEGQMGTDEAGDGAGPDTVEGGQSVPVAAGAGDTNICGGIVQLYWERILGQSLDLNGQ
VRQTALKIVEVVLRQGLVHPITCVPYLIALETDPYEANAKLAHHLLMNMNEKYPTFFESR
LGDGLQMSFIFIQTISRGSDNANKKVQSKGSSNLKSRSDGSSLTQARLGVSRIYKLIRAN
RVSRNNFISSIVRKFDSPRMNDSMIPFLMYCAEILALLPFTFPDEPLYLIYAINRIIQVR
GGALQEEIKALSVHLLQRNTQNVTYENGMIQLPQPGLFSDNIILSDMNGSAELDQPRPIC
NFMSMDLNQQIPPESAAHHELNNNSSKLEGKLHNISSMDSFSISKDDLQKIQTMSLAAIA
LQLLLKLKRHLKIVYSLNDARCQSFNPNEPPKPGEFLSKQNVPFDISETCTTLPTTYQEF
IQSYQDFKNTLRDDAFDYSTYTANIKRKRPTVRKGRKSTMGGDDDDNDDDEDWSGGRRLS
NSGRKSNYSMRGSRQR
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccgctctctgcttctgcttcttcctctgcctctacctcctccaaccgcggc
atcggcttgtctaatactatacactctgaagttgctccttgcttgcctttgccatcactt
ccggtcttctttggcgcctctgaccctcaccttcgcctctccgatcaccccgacgctacc
tatgctacctccacctctgatcttctccctcactctaggaagatcgctgatctgcttctt
gctactgatgtctcttacttaaatctcagagaagatgctaaggttcttcaagaagggcct
gtggagccttttgaactctatgaggaagttctacgccatgatggtgacgccttcagttat
actgctccaggtcctattatggatcatgtctccagcagtacggcacctgataggaaagtt
tttgagcaaagactacctattagaaatcaagttgaaggagactctagaacaactcaaagt
cataagactgaacctgaaactatgcctactaatgatacacaaatatcatcttctagaaaa
gtaaaaactaagaagaaaggccgtgatgaaacttcttctggtagaacagactcttctgag
cttcaagacaacacccttgcaaacacttgcgagttcttggaggacttttgtggtagagct
gaaattgtcgacgatgatcgtgatgaatcagagtggctggctcttcctcttactgatctt
cgaatgcttgtcaatgaaataatgtctatacgttcgaagaaacttcttcatttggttcct
ctagatatgctgacgaggctgttgaaggttctagataatcagatacatagagcagaagga
ttatctgttgaagaatgtgaacattcagattcagatgcagttgcagccatcttttgtgct
ttggagtccatacatgcatctctggcaataatggctcacgaccaaatgccaaagttgctt
tacaaagaagagatcatagagagaattctagagttttcccgacgccacataatggatatt
atgtgtgcttatgatccttcatatcgtgcattgcataaagtcagtgaaaatggtgcgttt
gaagtcattgaagacgaagaagatggtgactatggttcatcgactaagaaacgtcgtgct
gttaagactactaaaattaggaagcctgcactcaacaaggtatctaatgctgttaacact
attcttcagaagatgtgcaccattctcggtttacttaaggatttgttgttaatagagaga
ttaccagatagctgtattcttcaattagtgaaaacgagtttttctacttttttggtggac
aatattcagctcctgcaacttaaggcaattggtttaatttgtgggatattttattcatat
acacaacatcgtaactatttgatagatgaattagttcagatgctcttcaaattgccatcc
acgaaacgagctttaagagcatatcatctaccggaagaagaacaacgtcaaattcaaatg
attactgccctgttgattcaattagtacattatagtgcaaacctccctgaagctttgagg
caagcgtcagatagtcattccatttttgaagtttcagttgacagtagttgcccaaccaaa
tgccatgaagcagctacagaggcatgctgtcttttctggactcgtgtacttcagcggttt
gctaatgtgaagactcaagatgcatctgaagtgaaagtaatgatggaaaatatggttttg
gatctactcacaacattaaatttacctgaatatcctgcatcagctcctattttggaggtt
ctttgtgtgttattacttcaaaatgccggactgaaatctaaagacatctctgctcgttct
atggccattgattttcttggcatgattgctgcaaggttgaaacgtgatgcagtcatttct
gccacagacaagttttggatattgcaagagttgggaaataaagaggatgttgctgatcag
agttaccctaaagatgtctgttctatttgcttggatggcagggtggaaaagtgtatcctt
gtttgtcaaggttgtcagaggttatttcatgcagattgcatgggaggaactggaagggaa
aatgaaattcctaaccggggctggttctgtcaaatttgtcactgcagaaaacaacttcaa
gtcttacaatcatattgcaaatcccaatgcaagaatgatagtgagaagcggaaagattgg
tcagataaaggttccaatgcttcgtggcttgtttcaaacattgaaattgttcagcagttg
cttctgaattacctccaggaagttggttccacagatgatcttcatctatttgttcgctgg
ttctatctctgcctttggtacaaagatgatccaaaatctgagcagaaatttatttactat
ctctctagactgaaatctatggcaatagtgagggatggtggcaatacttcctctttattg
actagggattcagttaagaaaatcactcttgcactaggacaaaataattctttctctaga
ggttttgataagattcttcacatgcttctggcaagtttaagggaaaattctccagtaatt
agggccaaggctttaagagcggtcagtataattgttgaagctgatccagaggtattggga
gacaaacgtgtgcaactggctgtggaaggaaggttttgtgattctgcgatatctgtcagg
gaagcagctttggaacttgttggcagacacattgcctcacatcctgatcttggttttaag
tattttgaaaagatttctgagagagtcaaagatactggagttagtgtgaggaaacgagcc
atcaaaatcattcgagatatgtgcacgtcaaatgcaaatttcgcagaatttacaagggca
tgcatagagatcatttctcgagttggtgatgatgagtcaagtattcaggatcttgtttgt
aagacattctatgagttctggtttgaggagccttccagttcacaaacacagttctttggt
gatgatagctcagttccattagaaatagccaagaaaactgagcaaattgttgaaatattg
aggaaaatgccaaatcatcaacttcttgtgactattattaagagaaacttagcccttgat
tttttcccacaatcaaccaaggctgttggtatcaaccctgtttccctcacatcagttcgt
aagcgatgcgagttgatgtgtaagtgcttactggaaaggatattgcaggtggaggagcga
agtaacatggacactgaagtgcgggcacttccatatgtattggtcttgcacgccttttgt
gttgtggatccaatgctctgtgcgcctgcatccaacccatcccagtttgtggtcactctc
caaccttacctcaagagccaggttgataatcgagtggttgcccatttactcgagagtatc
atattcataattgatgcagtcttgcccttgctacgaaaattatctccaaatgttgctgaa
gatctagaacaagacttgaaacagatgattgttcggcactccttcttgacagttgtacat
gcttgcatcaagtgtctttgctctttgagtaagatagcaggtaaaggtgcatgggttgta
gagtatcttattcagatgttttttaaacgcttggattctcaaggggttgataacaaacag
ctagtaggacgctcactcttctgtcttgggttacttattcgctatggtagtcctttgctg
agcaattccagcaataagaatgttgatattaccaagagccttagcttgttaaagatgtac
ctgcagacggaagatttggttattagggttagagcgctgcaggctttgggatttgttctt
attgcgaggcctgaatttatgcttgaagaagatgttgggaaaattgtagaggaatcattg
tcatctggttctgatgttcgtcttaagatgcaagcattgcaaaatatgtatgattacctt
cttgatgcggaaggtcaaatgggaacagatgaagctggtgatggagctggccctgacact
gtggagggtggccaaagtgtacctgttgctgctggtgccggagataccaacatttgtggt
ggtattgttcagttgtattgggaaaggattctgggacaaagcttagatttaaatggtcaa
gttcgtcaaactgccctcaagatcgtggaagtggtgcttcgccaaggtcttgtccatccg
attacttgtgttccttatcttattgcacttgaaacagacccctatgaggcaaatgcaaag
ctggctcaccacttattgatgaatatgaatgagaagtacccaacattttttgagagccgc
ctgggggatggtcttcaaatgtcattcattttcattcaaactataagccgtggttctgac
aatgcaaataaaaaagttcaatccaagggctctagcaatttgaaaagtagatctgatgga
agttcattgactcaagcaagacttggagtttctcgaatttacaagctcatacgggcaaac
cgtgtttcaaggaacaattttatatcttccattgtgcgaaagtttgacagcccacggatg
aatgactctatgatacctttccttatgtattgtgcagaaatacttgcattgttaccattt
acattccccgatgagcccttatatttgatttatgctattaatcgaataatacaagtaaga
ggaggagcacttcaagaagagatcaaagcattgagtgttcatttgttacaaaggaatacc
cagaatgttacatatgaaaatggaatgattcagcttccacaacctgggttattttctgat
aatataattttatcagatatgaatggatcagcggagcttgatcagcctcgtcctatttgc
aatttcatgtcgatggatctgaatcagcaaataccaccagagtcagctgcccatcatgaa
ttgaacaataatagttctaaattggagggaaaactccacaacatttcctcgatggattca
tttagtatctcaaaagacgatcttcagaagattcagaccatgagcctggcagctattgca
ctgcagcttcttctgaagctaaagagacatctaaaaatcgtgtacagcctgaacgatgct
cgatgccagtctttcaatccaaatgaaccaccgaaacctggagagtttctgtccaagcag
aatgttcctttcgacatcagcgaaacatgcacaactttgccaacaacttatcaagaattc
atacaaagttatcaggatttcaagaacacgcttagggacgatgcattcgattactccact
tacactgcaaacattaaaaggaagcgtcctactgtaagaaaaggacggaaatctacaatg
ggtggcgatgacgatgacaatgacgatgatgaggattggagcggaggcaggagattgagt
aacagtgggaggaaaagtaactatagcatgagaggaagtagacaacgatga
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integrated database retrieval system
