Cucumis sativus (cucumber): 101207920
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Entry
101207920 CDS
T02486
Name
(RefSeq) WD-40 repeat-containing protein MSI2
KO
K10752
histone-binding protein RBBP4
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03082
ATP-dependent chromatin remodeling
csv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101207920
03083 Polycomb repressive complex
101207920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csv03036
]
101207920
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
101207920
Histone modification proteins
HAT complexes
HATB complex
101207920
HDAC complexes
Sin3A-HDAC complex
101207920
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
101207920
PRC2.2
101207920
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
101207920
Heterochromatin formation proteins
Other heterochromatin formation proteins
101207920
Chromatin remodeling factors
NuRD complex
101207920
NuRF complex
101207920
NuRF complex (fruit fly)
101207920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_Aladin
DSE1_N
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
WD_LRWD1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_NOL10_N
Beta-prop_SCAP
MIOS_WD40
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
ASA1
Beta-prop_WDR41
CFAP251_N
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
NBCH_WD40
PAC11
Motif
Other DBs
NCBI-GeneID:
101207920
NCBI-ProteinID:
XP_004144845
UniProt:
A0A0A0K5Y7
LinkDB
All DBs
Position
7:complement(906616..909049)
Genome browser
AA seq
393 aa
AA seq
DB search
MAGEEDGVDEVVEEFSIWKKNSPYLYDLLISHSLEWPSLTVDWVPSAPFPHQANPSLAVH
KLVLGTHTSEDVPNFLMVADAVFPVKASETRIDISEEDPILPKIEITQKIRVEGEVNRAR
CMPQNPEIVGAKTSGCEVYVFNRAKQGEKDQGVVCDPDLRLRGHDKEGYGLSWSPFKEGY
LLSGSNDQKICLWDVSSMADKNVLDAMHVYEAHESVVGDVSWHLKNENLFGSVGDDCLLV
IWDLRTNKSVDSVRAHEEEVNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHALSSH
TEGVFQVEWDPNHETVLASSGDDRRLMVWDLNNIGNEQDGDAEDGPPELLFSHGGHKAKI
SDFSWNSNEPWVISSVAEDNSVQVWQMAKSIYR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagaagaagatggtgtcgatgaagtggtggaagaattctccatctggaagaag
aactctccctatttgtacgatcttctcatttcccactctctggaatggccctctctcacc
gtcgattgggttccatcggccccctttcctcaccaggccaacccatctctcgccgttcac
aagctcgtcctcggaacccacacatcggaggacgtccccaatttcctcatggtggccgat
gctgtttttcccgttaaagcatccgaaaccagaatagacattagtgaggaagaccccatt
ctgccgaagatagagataactcagaagatacgtgttgaaggggaggtgaatagagcgcgg
tgtatgccgcagaacccagaaattgtcggtgcaaagacgagtggatgcgaggtgtatgtt
tttaatcgtgctaaacagggggagaaggatcagggagttgtgtgtgaccctgatttgaga
ttgaggggtcatgataaagagggttatgggttgtcttggagcccgtttaaggagggttac
ctcttaagtggctcaaatgatcagaaaatttgtttgtgggacgtatcctccatggctgac
aagaatgtgcttgatgcaatgcacgtctatgaggctcatgaaagcgtggtcggtgatgtc
tcatggcatttgaagaatgagaacttgtttggatctgttggtgatgattgcttgttggtg
atatgggatttgcgtacaaataaatctgtggattctgttcgagctcacgaggaggaggtg
aactacgtttctttcaatccatacaacgaatggattttagcaacagcatcatcagataca
acagtgggtctgtttgatctacggaagctcgccgagccactgcacgctcttagcagccac
acggagggagtgtttcaagtggagtgggatccaaatcatgaaactgtgttggcatcttct
ggtgatgatagaaggttgatggtgtgggatctaaacaacataggaaatgagcaagatgga
gatgctgaagatgggcctccagagttgttgttttcacatggaggacacaaagctaaaata
tcagacttcagttggaacagtaatgagccatgggtcatttcaagtgtggctgaagataac
tcagttcaggtctggcaaatggccaaaagtatttatcgatga
DBGET
integrated database retrieval system
