Cucumis sativus (cucumber): 101207976
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Entry
101207976 CDS
T02486
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101207976
03036 Chromosome and associated proteins [BR:
csv03036
]
101207976
Transcription machinery [BR:
csv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
101207976
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
101207976
SLIK complex
101207976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
SWI2_SNF2
DpnD_N
Motif
Other DBs
NCBI-GeneID:
101207976
NCBI-ProteinID:
XP_011657621
LinkDB
All DBs
Position
6:complement(22435786..22455601)
Genome browser
AA seq
1762 aa
AA seq
DB search
MAFFRNHSNEPGSHGVLEDKGHGQVTDRTHTSAGNDEEDMGTDKEFNMNMDAPYHSGGQV
DDSSRFQNEPAADDGIAMRVSNLQNSGRRTAVGRRWGSTFWKDCQPMIHGGSDSAQESKS
ESDNRSGEGSEDNLSNEKDGGSEFEDDDQIKEGKDQRRYTDVTAEDGMLSDEYYEQDGDE
QSDSLPYRGFHNSVKSNRLQSQSQSVNANSNHMRRNSRVVNDEDDDDGYDEDHNDDADYE
EDEEEEDDPDDVDFEPDYGVASGRSVKKQDKDWDGEDYEEDDGSDDDDLEISDDEGPNYG
KKGRGKQRGKGVRNVKSTSERKPYQSSIRQRKGKFSYEEDESSMEDSASDSVEAFKSSVK
TGTHLRKNSGRYSVTAGVSGRRSEVRTSSRSVRKVSYVESEESEEFDEGKKKKSQKEEVE
EEDGDAIEKVLWHQPKGTAEDAIRNNRPIDPVLSSHSFDSEPDWNEVEFLIKWKGQSHLH
CQWKPFSELQYLSGFKKVLNYTKKVMDEIRYRKSVSREEIEVYDVSKEMDLDLIKQNSQV
ERVIADRISKDGSGDVVPEYLVKWQGLSYAEATWEKDVDISFAQDAIDEYKAREAAISVQ
GKSVDLQRKKSKVSLRKLDEQPEWLMGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLG
KTVQSVSMLGFLQNAQQIYGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGTRASREVC
QQHEFENKRTGRPIKFNALLTTYEVVLKDRAVLSKIKWNYLMVDEAHRLKNSEAQLYTTL
SEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDFIHNYKNLSSFDEIELANLH
MELKPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVS
LLNIVVELKKCCNHPFLFESADHGYGGDFDSNDSSKLDRTIWSSGKLVILDKLLMRLHET
KHRVLIFSQMVRMLDILADYMSYRGFQFQRLDGSTKAEFRQQAMDHFNAPGSDDFCFLLS
TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSSSVEEDIL
ERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGIGFDKNELSAILRFGAEELFKEDKNDEDS
KKRLQSMDIDEILERAEKVEEKEAGGEEGHELLSAFKVANFCSAEDDGSFWSRWIKPEAV
SQAEEALAPRAARNTKSYAEANQPENSGKRKKGSGPVERVQKRRKGDISAPTAPMIEGAS
AQVRRWSCGNLSKRDALRFYRVVMKFGNESQISLIAGEVGGAVAAAKPEEQRELFNALID
GCRDAVESGSTDPKGPMLDFFGVLVKANELLNRVEELQLLAKRISRYEDPIKQFRALMHL
KPSNWSKGCGWNQIDDARLLLGVHYHGFGNWEKIRLDEKLCLMKKIAPVELQHHETFLPR
APNLRDRANALLEMELAALGKSLNPKAGRKTAKKDRENIPKASTSRGLDRKGKPGSPKVN
LKLRDRTSKPQRVETLVKEEGEMSDNEEVYEHFKEVKWMEWCEDVMADEIKTLERLHRLQ
TTSAKLPKEKVLSKIRNYLQLLGRRIDQVVLDHEEEPYKQDRMTMRLWNYVSTFSNLSGE
RLHQIYSKLKQEKEAGAGPSYLNGTGSALVGRDGDSSHFGALSRHLPRVRGNKNNTSLQI
SEPVQKGVETEKFETWKRRRRGGDADNQYQVPCPPDRPMSNGGRITDPNSLGILGAAPTE
NRRFSNDRPYRIRQTSFPVRQG
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atggccttttttaggaatcattcaaacgaaccaggttctcatggtgtattggaagataaa
ggccatggacaagttaccgatagaactcacacctctgcaggaaatgacgaagaggacatg
ggtacagataaagaatttaatatgaacatggacgcaccctatcacagtggaggtcaggta
gatgattccagtaggtttcaaaatgagccagctgcagatgatggaattgctatgagagtg
tcaaacttacaaaattctggaagaagaacggcagtgggtagaaggtggggttcaacattt
tggaaggactgccagcctatgattcatgggggttctgattctgcgcaggagtctaagagt
gagtctgacaatagaagcggagaaggatcagaagataatttatccaatgagaaggatgga
ggttcagaatttgaagatgatgaccaaataaaagagggtaaagatcaaagaaggtatacc
gatgtcactgcagaagatgggatgttgtcagatgaatattatgagcaggatggagatgag
cagagtgattccctgccgtacaggggatttcataactcagtaaagtcaaatagattgcag
tcacagtcacagtctgttaatgccaacagcaatcacatgcgaagaaattctagagttgtg
aatgacgaagatgatgatgatggatatgatgaagaccataatgatgatgccgattatgaa
gaggacgaggaagaagaagatgaccctgacgatgtggacttcgaacctgattatggcgtt
gcaagtggccgctcagtgaagaagcaggacaaagactgggatggtgaagattatgaggaa
gatgatgggagtgatgatgatgatttagagatttctgatgatgaaggacctaattatgga
aagaaaggcaggggaaagcaacgaggtaaaggagtacgcaatgtaaaatctaccagtgaa
cgtaaaccataccaatcatctattcggcaaagaaaaggaaaattctcatatgaagaggat
gaatcatcgatggaggattctgctagtgatagtgttgaggcttttaaaagttcagtgaaa
actggcactcaccttcgcaagaatagtggccgctattctgtaacagcaggtgtttcagga
cgcagaagtgaggtcagaacttctagtaggtcagttcgaaaagtttcatatgttgaaagt
gaagaaagtgaagaatttgatgagggcaaaaagaaaaagtcccaaaaggaggaagttgaa
gaggaagatggtgatgcaattgaaaaagttctctggcaccagccaaagggcactgctgaa
gatgctataagaaataatagacctatagatcctgtcctgtctagtcattcatttgattct
gaaccggactggaatgaggtggaatttttgataaaatggaaaggccagtcgcatttacac
tgtcaatggaaaccattctctgaactacaatatcttagtggttttaagaaggttttaaac
tacactaaaaaggtcatggatgaaatcaggtacaggaagagtgtctcccgtgaggagatc
gaggtctatgatgtcagtaaggaaatggatttggatctcatcaagcaaaatagtcaggtg
gagagagttatcgctgaccgtatcagcaaagatggttcaggtgatgtagtaccagagtat
ttggtaaagtggcaagggttgtcttatgccgaagcaacttgggaaaaggatgtagacatt
tcatttgcacaagatgctatcgacgagtataaggctcgtgaagctgcaatatctgtgcaa
gggaaatctgttgatcttcagcgtaaaaagagtaaagtgagtttaaggaaacttgatgaa
cagcctgagtggttgatgggaggcaagcttcgagattatcagcttgagggtttgaatttt
cttgttaatagttggagaaatgatactaatgtaattttagctgatgaaatgggtcttggg
aaaactgttcagtctgtttccatgcttggctttctacagaatgcccaacaaatttatggg
ccatttcttgttgttgtaccactgtccaccctgtcaaactgggctaaagaatttaggaag
tggcttcctgatatgaatgttattgtctatgtcggtacccgtgcaagcagagaggtttgt
cagcagcatgaatttgaaaataaaagaactggcagacctataaagtttaatgctttgttg
actacgtatgaagttgttctgaaggaccgtgccgttctttcaaagattaagtggaattat
ttgatggtcgatgaagcacatagattaaagaatagtgaggcacagttgtatacgaccctt
tcggaatttagcacaaaaaataaattgctcattactggtactccgttacagaacagtgtg
gaagagctatgggctttgcttcactttcttgatcctgataagttcaagagtaaggatgat
tttattcataattacaagaaccttagttcgttcgatgagattgagcttgctaatcttcac
atggaactgaagcctcacatcctgcgtcgtgttatcaaggatgtcgagaagtctttgcct
cctaaaattgagcgtattcttagggtagagatgtctccgcttcagaaacaatattacaaa
tggattttagagcgcaactttcatgacttaaacaaaggagttcgtgggaatcaggtttct
cttttgaatattgtggtggagttaaagaaatgctgcaatcacccctttctgttcgaaagt
gcagatcatggttatggtggggacttcgactcaaatgatagcagcaagctggatagaaca
atctggagcagcgggaagctagttatacttgataagttgttaatgagattgcatgaaaca
aagcatcgggttctgattttttcacagatggttagaatgcttgatattctggctgactac
atgtcatatagaggattccaatttcagaggcttgatggaagtacaaaggctgagtttcgg
cagcaggctatggatcattttaatgcacctggtagtgatgatttttgcttccttctttca
actcgagctggtggtttaggtataaaccttgcaacagcagatacagttatcatatttgat
tcagactggaacccacagaatgacttacaggcgatgagtagagctcacagaattggacaa
caggaagtagttaatatttacagatttgtaacaagcagtagtgttgaggaagatatcttg
gagcgagcaaagaaaaagatggttcttgaccatctggtgatccaaaaattaaatgcagag
ggtagattggagaagaaagaagcgaaaaaaggcattggttttgataaaaatgagttatca
gcgatcttaaggtttggggctgaggaacttttcaaggaggacaagaatgatgaagatagt
aagaaacgacttcaaagtatggatattgatgagattcttgaaagggcagagaaggttgaa
gaaaaagaagcaggaggagaggaagggcatgaattgctgagtgctttcaaggttgctaac
ttttgtagtgctgaagatgatggaagtttctggagtcgttggataaaacctgaagctgtg
tctcaggctgaagaagctctcgctcctcgtgctgccaggaatacaaagagctatgcagag
gctaatcagcctgagaatagtggtaaaagaaaaaaaggatctgggcctgtggagagggtt
cagaaacgccgtaaaggtgatatttctgctcctacagcaccaatgattgagggtgcatct
gctcaagtgagaaggtggtcttgtgggaatttgtcgaaaagagatgcattacgtttttat
cgcgtggttatgaaatttgggaatgagagtcaaattagcttgatagccggtgaggttggt
ggtgcagttgcagcagctaagcctgaagagcaaagagaactattcaatgctttaattgat
ggctgtcgagacgctgttgaatcaggatcaacagatccaaagggacctatgttagatttc
tttggtgtgctagtgaaagctaatgagcttctcaatcgagttgaagaacttcagcttcta
gcaaaaagaattagccgctatgaagatcctattaaacaatttcgtgccttgatgcacctg
aaaccttctaattggtcaaaaggttgtggttggaaccaaattgatgatgcaagattactt
ttgggagtacactatcatggttttggtaattgggaaaagatcaggttggatgagaaactc
tgtctcatgaaaaagattgctccagtggaacttcaacatcacgagacctttctgccacgt
gctccaaatttgagagatcgtgctaatgcgcttctggagatggaacttgctgccctcggt
aaaagtctgaatcctaaagctggtcgcaagactgcaaagaaggatagggaaaatatccca
aaagcttcaacatcacgtggcttggatcgaaaggggaaaccaggttctcccaaggttaac
ctaaaattgagggaccggacttctaaacctcagagagttgagaccctcgtgaaggaggag
ggtgaaatgtctgacaacgaagaagtatatgagcattttaaggaggttaaatggatggaa
tggtgtgaagatgtcatggctgatgaaattaaaactctagaacgacttcatagattacag
acaactagtgccaaactcccaaaggaaaaggtgctttcgaaaattcgcaattacttgcag
cttcttggacgaaggatagatcaagttgttcttgatcacgaggaagaaccgtataaacaa
gacaggatgactatgcggttatggaattatgtctccaccttttcaaatttatctggggag
agacttcatcaaatttattcaaaactcaagcaagaaaaagaagcgggagcaggtccatcc
tatctcaatggtactggctctgctcttgtgggcagggatggggattcctctcattttgga
gccttatctcgtcatcttccgagggtacgggggaacaaaaataatacttccttacaaata
tctgaaccagttcagaagggggttgaaaccgagaaattcgaaacatggaaacgacgaaga
agagggggggatgcagataaccaataccaagttccttgtccacctgatagacccatgagt
aacggtggtcggataacagatcctaactcattggggattcttggggcagcaccaaccgag
aacaggaggttttctaacgatcggccatataggattcgtcaaactagttttcctgtgaga
caaggttga
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integrated database retrieval system
