Cucumis sativus (cucumber): 101207984
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Entry
101207984 CDS
T02486
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101207984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101207984
03036 Chromosome and associated proteins [BR:
csv03036
]
101207984
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101207984
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101207984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
101207984
NCBI-ProteinID:
XP_011659611
LinkDB
All DBs
Position
7:complement(21625272..21639222)
Genome browser
AA seq
1082 aa
AA seq
DB search
MDEEMDVSPSYFDPEDLTIRERFRRYRKRSSNISPHKEVIPSTINESRILYDGQGFHSPT
NAALLLENFQEEAESLVGDCLEATPLKESSASKRRLSIDSQEISVVSLGPDSVRLSLKAC
RHENDPLSNSGDTTYNFFASLMDSSIQGLMSIPDLILRFESSCRIVSESIRYGSNTQHRF
IEDKLMRQKAQLLVDEAASWSLLWYLYGKATKETPKDLIVFPPTSHLEACQFVSEDHTAQ
LCLRIVEWLEGLASKALDLESKIRGSHVGTYLPCSGVWHNTQWSLKKGISNTNAIHHLDF
DAPTREHAHQLPDDRKQDESLLEDSWTLIKAGRMKEACDLCRSAGQPWRAATLCPFGGLE
HFPSIDALVRNGKNRTLQAIELESGIGHQWRLWKWASYCASEKIAEVDGGKYEAAVYAVQ
CGNLKRVLPICTDWESACWAMAKSWLDVQVDLELTRSHGKMDLSKSIMDTVDGSPGQSDR
TSQVSDGPESWPLPVLSQQPRQISVLLQKLHSGDMVHENVNRGCKEQQRQIQMILMLGDI
PRLLDLIWSWIAPSEQDQDVFRPHGDPQMIRFGAHLVLVLRFLLAEEMKDIFREKIMNVG
DLILHMYAMFLFSMQHEELVGVYASQLASHRCIDLFVHMMELRLNSSVQVKYKIFLSAIE
YLPFSPDNDSKGSFEEIIESVLLRSRDTKIGSSDKLSDAVEQQRLQSLQKAMVVQWLCFT
PPSTIANVKDVSTKLLLRALAHSNILFREFALISMWRIPSMPNGAHKLLSLLAEPLRQHS
ETFSALEDNGVLENLKEFQDWSEYFSCDATYRNWLKIELENNEAPSMDLSMEEKQRSIVA
ANETLDSSLSLLLRKESPWLGFAEDHLFESMEPVYLELHATVMLCLPSGECLCPEAATCT
TLTSALYSSVTEQIILNRQLVVNVSIASGEGFCIEIVLRCLAAPGDGLGHREVNDGGILG
CVMAAGFKGELRGFQAGVTLEVLRLDALYSNEDGSLKDPAAYIVQGLCRRCCLPEVILRC
MQVSVALMELGFEPKCHDNLIELVGSSESGFSDLFSQQQFEEFLILEREYTLRKMEVGEL
SS
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaatggacgtctctcccagctactttgaccctgaagacctcaccattcgg
gagcggtttcgtcggtacaggaaaaggtcgtcaaacatatcacctcacaaggaagttata
ccttcaacaatcaacgagtctaggattttgtacgatggacagggtttccatagtccgact
aatgctgcactgcttcttgaaaattttcaagaagaggctgaaagccttgtcggtgattgt
ctggaagcaacaccattgaaggaaagttctgcttctaaaagaagattatcaattgatagc
caggaaatttcggtagtatctcttggtcctgattcggttcgactctcattgaaggcttgc
aggcatgagaacgacccattatctaatagtggagatacaacttataacttttttgcatct
cttatggactcttcaattcaaggattgatgtctataccagacttgatattaagatttgag
agctcttgccgtattgtttcagagtcgataaggtatggttccaacactcagcaccgcttt
attgaagacaaattgatgaggcagaaggctcaattacttgtagatgaagcagcctcctgg
tcccttttgtggtacctgtatgggaaagctacaaaagagacgcctaaagatctaattgtg
tttcccccaacatcacatttagaggcctgccagtttgtctcagaagatcatacagctcaa
ttatgtcttagaattgttgagtggctggaaggtttagcctctaaagcacttgatttggaa
agcaagattcgtgggtctcatgttggtacatatcttccatgttctggagtttggcataat
actcagtggtctctcaagaaagggatctctaacacaaatgctattcatcacttggatttt
gacgctccaacacgtgagcatgcccatcaactgccagatgacagaaaacaagatgaatct
cttttagaagattcctggactcttataaaagctgggagaatgaaagaagcatgtgatctc
tgccggtcagcaggacagccatggagagctgcaactttgtgtccttttggtggattggaa
cactttccttccattgatgctttggtaaggaatggaaagaacagaactctacaagccatt
gagctagaaagtggcattggccaccaatggcgtctttggaaatgggcttcctattgtgca
tctgagaaaattgcagaagtagatggtgggaagtatgaggctgctgtgtatgctgttcaa
tgtggaaatttgaagcgtgtacttcctatatgcacagattgggagtcagcatgctgggca
atggcaaagtcatggctggatgttcaagtagatcttgaactcactcgttcccatgggaaa
atggatctttccaaaagcattatggacactgtggatggaagtccaggacaaagtgataga
acctcccaggtttctgatggaccagaaagttggccacttccagttctgagccagcaacca
cgtcaaatttctgtcctccttcaaaaactccattcaggtgacatggtgcatgaaaatgta
aaccgtggatgcaaagaacagcagcggcaaattcagatgatcttgatgcttggagacatt
cctcgtcttttggacctcatctggtcatggatagcaccttcagaacaggaccaagatgtt
ttcaggcctcatggtgatccacaaatgattcgttttggtgcgcatttagtgctcgtgctt
cgatttttgcttgccgaagaaatgaaagatatcttcagagagaagatcatgaatgttggc
gatcttattttacacatgtatgccatgtttctcttctcgatgcaacatgaggagctggtt
ggtgtatatgcttctcagctagcaagccatcgatgcattgacctctttgtgcacatgatg
gaacttcggctcaatagcagcgtgcaagtcaagtataagatctttctctccgctattgaa
tatctaccattctctcctgacaatgattcaaagggcagttttgaagagattatcgaaagt
gtattattaagatctcgggacaccaaaattggtagttctgataagttatcagatgctgta
gaacaacagcgcttgcagagtcttcagaaagctatggttgtccagtggctctgctttacc
cctccttccacaattgctaatgtcaaagatgttagcaccaaacttcttctccgagcattg
gcacatagcaatatcttgttcagagagtttgctctgatatccatgtggagaattccttca
atgcctaatggtgcacacaagttacttagtcttcttgctgaacctttgaggcagcattca
gaaacatttagtgcgttggaggataatggcgttttggagaacttaaaagagttccaggat
tggagtgagtatttctcctgtgatgcaacatatcgcaactggctcaaaattgagttggag
aataatgaagcgccttccatggatctctcaatggaagaaaaacaaagatccattgtagct
gctaatgagacactggattcctcactttcattattacttagaaaagaaagtccatggttg
ggatttgcagaagatcacctctttgagtcaatggagcctgtctatcttgaattgcatgcc
actgtcatgctgtgtttaccttctggagaatgtttgtgccctgaagctgccacgtgcaca
accttaacaagtgccctttactcttcagttactgagcagatcatattaaatcggcaactt
gtggtgaatgtctccattgcatcaggggaaggtttctgtattgagattgtgcttcgctgt
ttagcagcaccaggcgatgggcttgggcatcgtgaagttaatgatggtggcattcttggt
tgtgtcatggcagctggattcaaaggtgagcttcgaggttttcaagctggagtcactttg
gaggtcttgcgtttagatgctttgtattcaaatgaagatggttcactaaaagaccctgca
gcatatattgtgcaaggcctatgtcgtcgatgctgccttccagaagttattcttcgatgc
atgcaggtttctgtggctctgatggagctgggatttgaacccaaatgccatgataatttg
atcgaactcgttgggagctctgaatctggattttctgatttgttcagccagcaacaattc
gaggagtttttgatactcgagagagaatatacattacgcaaaatggaggttggagagctt
tcttcttga
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