Cucumis sativus (cucumber): 101208491
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Entry
101208491 CDS
T02486
Name
(RefSeq) phytochrome A
KO
K12120
phytochrome A
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101208491
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_9
PAS_4
HisKA
PAS_8
PAS_10
Motif
Other DBs
NCBI-GeneID:
101208491
NCBI-ProteinID:
XP_004146753
UniProt:
A0A0A0KJ32
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Position
6:20046579..20053298
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AA seq
1123 aa
AA seq
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MSSSRPSQSSSNSGRSRHSTRIIAQTSVDAKLHADFEESGNSFDYSSSVRVSSDVSGDHQ
PRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSMGDY
PVLGIGTDVRTIFTAPSASALLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLII
DFEPVKPYEVPVTAAGALQSYKLAAKAITRLQSLPSGCMARLCDTMVQEVFELTGYDRVM
AYKFHDDDHGEVISEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKV
LQDEKLQFDLTLCGSTLRAPHSCHLQYMANMNSIASLVMAVVVNEGDEDAEGPALQQQKR
KRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCD
MLMRDAPLGIVSRSPNIMDLVKSDGAALLYKNKIWRLGMTPSDFHLRDIASWLAEYHMDS
TGLSTDSLYDAGYPGALALGDEVCGMAAVRITTNDMIFWFRSHTASEIRWGGAKHEHGEK
DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDTDTDEINRKSIQM
TLGDLKIEGRQELESVTSEMVRLIETATVPILAVDVDGLINGWNTKIAELTGLPVDKAIG
KHLLTLVEDTSVEVVKKMLYLALQGQEEQNVQFEIKTHGSHIEVGSIRLVVNACASRDLR
ENVVGVCFVAQDITGQKMVMDKFTRLEGDYKAIVQNPNPLIPPIFGSDQFGWCSEWNAAM
TKLTGWSREEVIDKMLLGEVFGAHKSCCRLKNQEAFVNLGVVLNNAMSGQDPEKVSFGFF
GRNGMYVECLLCVNKILDKDGVVTGVFCFLQLASHELQQALNIQRLCEQTALKRLRALGY
IKRHIQNPLSGIIFSRRLLERTELGTEQREILLTSLHCQKQISKVLEESDLDQIIDGFID
LEMVEFTLHEVLKVSISQVMIKSKGKAIQIVNETVEEAMSETLYGDSLRLQQVLADFLLL
SVSYAPAGGQLKISTNLTKDQLGKSVHLVHLEFRITYAGGGIPESLLNEMFGSEEEASEE
GFSLLISRKLVKLMNGDVRYMREAGKSSFIITVELAAAHKASM
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctctagacctagccagtcttctagcaactctggccggtcaagacatagcacc
agaataattgctcaaacatctgttgatgcgaaactccatgctgattttgaggaatctggg
aattcattcgactactcaagttcagtgcgtgtctctagtgacgttagtggagatcaccaa
cctaggtcagacaaagttacaacagcttatctccaccatatacagaaagggaaacttatc
caaccatttggttgcttattggccttagatgaaaaaacattcaaggttattgcatatagt
gaaaatgcccctgaaatgttgaccatggtcagtcatgctgtcccaagcatgggggattac
cctgttcttggcatagggacagatgtgaggactattttcactgcacctagtgcttctgca
ctgttgaaggccttgggctttggggaggttacacttcttaatcccatcctggtgcattgc
aagacttctggaaaacccttttatgcaattgtgcatcgtgttactggaagcttaatcatt
gactttgagcctgtgaagccttatgaagtcccagtaacagcagctggagccctacaatca
tataaacttgcagccaaagcaattactagattgcagtccttgcctagtgggtgcatggct
aggctttgtgacacaatggttcaagaagtttttgaactaactggttatgatagagtcatg
gcttataaattccatgatgatgatcatggggaagtgatctctgaagtcacaaagcctggt
cttgagccgtatcttggtttgcattatccggccactgacattcctcaagctgcacgcttt
ttgttcatgaaaaataaggtccgcatgattgttgattgtcgtgcaaaacatttaaaagtg
ctccaagatgaaaagttacagtttgatctaactttatgcggatcaacattaagggctcca
cacagttgccacttacagtatatggcaaacatgaactcaatagcctctttggttatggca
gttgtggttaatgaaggggatgaagatgccgagggccctgctttgcagcaacaaaagaga
aagagactatgggggttagtagtatgtcataatacaagtcccagatttgttccttttcct
cttaggtatgcttgtgagtttcttgctcaagtatttgctattcacgtgaacaaggaattg
gagttggaaaatcaaattatagagaaaaatattctgcgtacacagacactcttatgcgac
atgctaatgcgtgatgctcctttaggtattgtgtcaaggagtcctaacataatggatctt
gtgaaatctgatggggctgccttgttatataagaacaaaatttggcgattgggcatgaca
cccagcgacttccatttgcgggacattgcctcgtggcttgccgaatatcatatggattca
acagggttgagtactgacagcttgtatgatgcaggatatcctggagctcttgctttaggt
gatgaagtatgtgggatggctgccgtgcggataactactaatgatatgattttttggttt
cggtctcacactgcttcagagattcggtggggtggagcaaagcatgaacatggtgagaag
gacgatggcagaaaaatgcatccaagatcatctttcaaggctttccttgaagtagtgaaa
acaagaagtttgccttggaaggactacgaaatggatgcaatccactctttacaactgatc
cttagaaatacttttaaagatacagatacagatgaaataaatcgaaaatcaattcaaatg
acacttggtgaccttaaaattgaagggaggcaagaattggaatcagtaacaagtgaaatg
gtcaggttaattgagacagctactgtgccgattttagcagttgatgtagatgggttaatt
aatgggtggaatacaaagattgctgaattgactggactccctgtggataaagctattggc
aagcatttgcttacgttagtggaagatacttctgtagaagttgtcaagaaaatgttgtat
ttggcattgcaaggacaagaagagcaaaatgttcaatttgaaatcaagacgcatggttct
catattgaggttggctcgatcaggcttgttgtaaatgcttgtgcaagtagggacttgcgt
gaaaatgttgtgggggtgtgttttgtagcacaagatatcactggtcagaagatggttatg
gacaagttcactcgattagaaggtgattacaaagctattgtacaaaatcccaatccattg
atccctccaatatttggttcagatcaatttggatggtgctcagaatggaatgctgcaatg
acaaaattaactgggtggtcacgggaagaagtaattgataagatgcttttaggagaggta
tttggtgctcacaagtcatgttgtcgtttaaagaatcaagaagcttttgttaatcttggg
gttgttttgaacaatgccatgagtggtcaagatcctgagaaggtttcctttggcttcttt
ggtcggaacgggatgtacgtggaatgtcttctatgtgtcaataagatcttggataaggat
ggggtggttacaggagttttttgctttctgcagcttgctagtcatgagttgcaacaagca
ctaaatatccaacgattatgtgagcagactgctttgaagagattgagagcattgggatac
ataaaaagacacatacaaaatcctctttctgggataatcttttcgagaagattattggaa
cgtaccgagttgggaacagaacaaagggaaattctgcttactagcttacactgtcaaaag
caaatctccaaggttctggaagagtctgaccttgatcaaattattgacgggtttattgat
ctggaaatggtcgagtttacattgcatgaagtattgaaggtatcaatcagtcaagtgatg
ataaagagcaaaggaaaggctatccagatagttaatgagactgtagaagaggccatgtcc
gagaccttatatggtgatagtttgaggcttcaacaagtcttggcagattttctattgcta
tcagttagttatgcgcctgcaggaggccaactgaaaatttcaaccaacttgacaaaggat
caattaggaaagtcggttcatctcgtgcatttggaattcaggataacgtatgctggaggt
ggtatacccgaatcgttgctgaacgagatgtttggtagcgaggaggaggcttctgaggag
ggttttagtctactcatcagtagaaaactagtgaagctaatgaatggagatgtaagatac
atgagggaagcaggtaagtcaagcttcatcataactgttgagcttgctgctgcacacaag
gcaagtatgtag
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