Cucumis sativus (cucumber): 101208532
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Entry
101208532 CDS
T02486
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csv03036
]
101208532
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
101208532
REST complex
101208532
Heterochromatin formation proteins
Other heterochromatin formation proteins
101208532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
101208532
NCBI-ProteinID:
XP_011655653
UniProt:
A0A0A0KVR5
LinkDB
All DBs
Position
5:complement(26006158..26016362)
Genome browser
AA seq
1443 aa
AA seq
DB search
MKRSRDDVYMGSQLKRPAISTRAEASTQPQMAGAGSTQKLTTNDALVYLKRVKDIFQDKR
QQYEDFLEVMKDFKAQRIDTAGVIGRVKDLFKGHRDLILGFNTFLPKGYEITLPLEDDQP
TQKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVAALFQEH
PDLLVEFTHFLPDSSATGSVHYSSGRGLMLRDRHSAMPSMRQMQVDRKDRTIASHAERDL
SVDRPEPDHDRALMKLDKDQRRRGDKEKERRDDRERREHDRERVDRDYEHDGRRDCNMHR
FPHKRKSARRIDDSSAEQLHPGGEGDENFGVHPISSYDEKNSAKSLYSQEYAFCERVKEK
LRNSEDYQEFLKCLHIYSKEIITRAELQSLMGDLLGRYSDLMDGFNEFLSRCERNDGFLA
GVTSRKSLWNEGSLPRTVQVEDRDRDRDRDREKEDISKDRDRENRERDRLEKNTTFGSKD
IVGHRMSVFSSKDKYLAKPINELDLSNCERCTPSYRLLPKNYPIPSASQRTDLGDQVLND
HWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNN
VIKADCPITIEDHLTALNLRCIERLYGDHGLDVMDVLRKNAPLALPVILTRLKQKQEEWA
RCRYDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISEKKRKEDDVL
LAIAAGNRRPIIPNLEFEYPDPELHEDLYQLIKYSCGEICSTEQLDKVMKVWTTFLEPML
GVPSRPHGAEDTEDVIKAKIHPTKSATVVESDGSPGGGATMMHPKQLNSSRNGDESIPPE
QSSSCRTWPLNGDNGVKEDSFHDADRTVRKGDPFCSISQHTKIQDNVPVNDELSGVSKQD
NSTECFVNSNVSLATAAEQSNGKPNIENTSGLSTTPSRLGNGGAVESGIELPTSEVGGPT
RQILTANGAVTDGTKGHRYAEEPARHLKIEREEGELSPNGDFEEDNFANYDGELKALPKV
KEGVAGRQYPSNRGEEELCCREAGGENDADADDEGEESAQRSSEDSENASENGDVSASDS
GDGEDCSREDHEDGEHDDNKAESEGEAEGMADAHDVEGDGTSIPFSERFLLTVKPLAKHV
PPLLHEEGKESHVFYGNDSFYVLFRLHQTLYERIQSAKINSSSSERKWRASNDTTPTDLY
ARFMNALYSLLDGSSDNTKFEDDCRATIGTQSYVLFTLDKLIYKIVKQLQTVASDEMDNK
LLQLYAYEKSRKMGRFVDAVYHENARVLLHDDNIYRIERSSTPTHLSIQLMDYGYDKPEV
TAVSMDPIFSSYLHNDFFSVLPEKKVKSGIFLKRNKRKYACGDENSAACHAMEGLKIVNG
LECKIACNSSKVSYVLDTEDFLFRRNSKRKRLHGNNSCHNQSRSSSGDSSRRVQKFHKLL
ENS
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtctagagacgacgtttatatgggttctcaacttaagcgtcctgcgatttct
actcgtgcagaagcatctacacaaccccaaatggcgggagcaggaagtactcagaaatta
accactaatgacgccctagtatatctcaagagagtgaaggacatatttcaagacaagaga
caacagtatgaagacttccttgaagttatgaaagatttcaaggcccaaagaattgatact
gcgggagtcattggaagagtaaaagatttgtttaaaggccatcgagatctcattttgggt
ttcaatacattcttgcccaaaggatatgagatcactctccccctggaggatgatcaacct
acacaaaagaaacctgttgagtttgaagaagctatcaattttgtgaacaagataaagaca
cgttttcaaggcgatgatcatgtttataaatcatttttagacattttaaatatgtacaga
aaggaaaacaagtccatcactgaagtttaccaggaggttgctgcacttttccaagaacac
ccagacttgcttgttgaattcactcattttcttccagattcttcagccacaggatctgtt
cactacagctctggaaggggtttaatgcttcgtgataggcattcggccatgcccagtatg
cggcaaatgcaagttgaccggaaagaccgtactattgcgtcccatgctgaacgtgacctt
agtgttgaccgtccagaaccagaccatgatcgggccctaatgaaactggacaaagatcaa
cgtaggcgtggcgataaggaaaaggaaagaagagacgatagagagaggagagaacatgat
cgggaaagggttgaccgtgattacgagcatgatggaaggagggactgtaacatgcatcgg
tttccccacaagaggaaatctgcacgtaggattgatgactcatctgcagagcaattgcat
ccaggtggagaaggtgatgaaaattttggcgtacatcccatctcttcttatgatgaaaaa
aattctgcaaagagtttatacagtcaggagtatgctttctgtgaaagagttaaagaaaag
ttgcggaattctgaagattaccaggaatttttgaaatgtctccatatctatagcaaggag
ataattaccagagcagaacttcaaagtttgatgggtgatttacttggaaggtattctgat
cttatggatggtttcaatgaatttttgtcacgatgcgagaggaatgatggatttcttgct
ggtgtcacgagtaggaagtcattgtggaatgaaggaagtttgcctagaacagtgcaagtg
gaggatagggacagagatagagatcgtgaccgtgagaaagaggatatttctaaagataga
gatcgtgaaaatcgagaaagagatagacttgaaaagaatactacatttggaagtaaagat
attgtaggtcacaggatgtctgtattttctagcaaagacaagtatttggcaaagccaata
aatgaacttgatctatcgaactgcgaacgttgcacgcccagctaccgccttctgcccaaa
aattatccgataccttcagcgagccaaagaacagatcttggtgatcaagtgttgaatgat
cattgggtatctgtcacttctggaagtgaggattactcctttaaacatatgcgcaaaaac
cagtacgaagagagccttttccgatgcgaagacgacaggtttgaactcgatatgttgctg
gagtctgtgaatgtgactactaagcgtgttgaggaactccttgaaaagatcaacaacaat
gtgatcaaagcagattgtccaatcacaattgaggatcaccttactgctctaaatctgagg
tgcattgagcggttatatggtgaccatgggcttgatgttatggatgtgttgaggaagaac
gcacctcttgctcttccagttattttgacccgattgaagcagaaacaggaagaatgggcg
cggtgtcgttatgacttcaataaagtttgggctgaaatatatgccaaaaactatcataag
tcacttgatcatcggagcttctacttcaagcaacaagacacaaaaagtttgagcactaaa
gccctgttggcagagatcaaagagatcagtgagaagaagcggaaggaagatgatgtgttg
cttgctattgctgctggaaatagacgacccataattcccaatttggaatttgagtatcct
gatcccgagcttcatgaagacttatatcagctaatcaaatattcctgtggagaaatttgc
tcaacagaacaattagataaggttatgaaggtatggacaacctttttggagcccatgctt
ggtgttccttcccgaccacatggtgccgaggacactgaagatgttattaaggcaaagatt
catcctaccaagagtgccactgtggtagagagtgatggaagtcctggtgggggtgctact
atgatgcacccaaaacaattgaattcttctagaaatggtgatgaaagcattccacctgaa
caatcaagttcttgcaggacttggcccctgaatggggacaatggagtcaaagaagatagt
ttccatgatgcagatcgtacagtacggaagggagatcctttctgcagtatttcccaacac
actaaaattcaggataatgtgcctgtgaatgatgaattgtctggagtaagtaaacaagac
aattctaccgaatgctttgtcaattcaaatgtatcccttgcaactgcagccgagcaaagt
aatgggaagcctaacatagaaaacacatcaggattgagcactactccttcacgtcttgga
aatggtggtgctgttgagagtggaattgagttacctacctcagaggttggtggccctaca
agacaaattctaactgcaaatggtgcagtcacagatggcacaaaaggccatagatatgct
gaagagcctgccagacatttgaagatagaaagggaagagggtgaattatctccaaatggg
gattttgaagaagataactttgccaattacgatggggagctgaaagctctgccgaaagtg
aaggaaggtgttgctggcaggcagtatccaagcaaccgaggcgaggaagaattatgttgc
agagaggctggtggagaaaatgatgctgatgctgatgacgaaggggaggaaagtgcacaa
aggtcatcagaggatagtgaaaatgcctcggagaacggtgacgtttctgcaagtgattcc
ggtgatggagaggattgttctcgtgaagatcatgaggatggagaacatgatgataacaag
gctgagagtgaaggtgaggcagaagggatggccgatgcccatgatgtagaaggagatgga
acatctataccattctctgagcgctttctattgactgtaaagcctcttgccaagcatgtt
cctcctctgttgcacgaagaaggaaaggagtctcatgtattttatggaaatgactctttt
tatgtgctttttaggcttcaccaaacgctgtatgagagaatacaatctgcgaagatcaac
tcttcatcctcagagaggaaatggagggcctcaaatgatacaacccccacagatctttat
gccaggttcatgaatgcactttatagtctactggacggttcctctgataacacaaagttt
gaagatgattgccgagccactattggaacccagtcatatgttctgttcacattagacaaa
ctaatttataaaattgtcaaacagcttcaaacagttgcctcagatgagatggacaacaaa
cttctccaactatatgcgtatgaaaagtcaagaaaaatgggaagatttgttgatgcagtt
tatcatgaaaatgctcgcgtacttcttcatgatgataatatctatcgcatagaacgatca
tccactcctactcatctttcgattcagcttatggactatggctacgataagcctgaagta
acggctgtttccatggaccccattttttcgtcttatctgcataacgacttcttctcagtt
ctccctgagaaaaaagtgaaatcagggatcttcttgaagagaaacaaacgtaaatatgcc
tgtggcgatgagaattctgctgcatgccatgctatggaagggcttaaaattgttaatggt
ctggagtgtaaaattgcatgcaattcatcaaaggtttcgtacgttttagatacagaagac
tttttatttcgtagaaatagcaaaaggaaacgtttgcatggaaataactcatgccacaac
cagtcaaggtcttctagtggcgattcaagtaggagagtacagaagttccacaagctactt
gagaactcatga
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