Cucumis sativus (cucumber): 101208545
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Entry
101208545 CDS
T02486
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03030
DNA replication
csv03420
Nucleotide excision repair
csv03430
Mismatch repair
csv03440
Homologous recombination
csv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101208545
03420 Nucleotide excision repair
101208545
03430 Mismatch repair
101208545
03440 Homologous recombination
101208545
03460 Fanconi anemia pathway
101208545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csv03000
]
101208545
03032 DNA replication proteins [BR:
csv03032
]
101208545
03400 DNA repair and recombination proteins [BR:
csv03400
]
101208545
Transcription factors [BR:
csv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101208545
DNA replication proteins [BR:
csv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
101208545
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
101208545
MMR (mismatch excision repair)
101208545
DSBR (double strand breaks repair)
HR (homologous recombination)
101208545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF8448
BRC-2_C
PIH1_CS
Rhabdo_glycop_CD
Motif
Other DBs
NCBI-GeneID:
101208545
NCBI-ProteinID:
XP_011648462
UniProt:
A0A0A0LSG2
LinkDB
All DBs
Position
1
Genome browser
AA seq
623 aa
AA seq
DB search
MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSN
LTSDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEAG
TILKPKVELDDKSTFNNGSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPL
VYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFY
EKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKI
DMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDL
ATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSE
GKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPD
QTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEE
AERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRS
VAPVDFAAESRFLLEEIAKMKAS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcaccaactgctggcggaatatcaaaggttttgtccaatccatcaccggac
tccccctccgatgtccccgatgttgtggttcaggtcattgatcttaaggcgacgggaaat
cgctacatgtttactgctagtgacggtgtcatgaagcttaaagctattcttccatcgaat
ttgacttctgacgtcatttctggaaacattcaaaatttggggcttattcgcattcttgac
tactctctcaatgatattccaaacaagtcagaaaagtatttaatcgtgacaaaatgtgag
gtggtttctcctgctctagaaaaggaggtaaaaactgaggttaagacagaggaagcaggt
actattttaaaaccgaaggtagagcttgacgataagagcacatttaacaatggttctggt
attattctgaaaccaaagcaagaattggttgctaaatcagctgctcagattgtacacgag
cagcgtatgaacatggcaccagctgcccggatgtccatgacaaggcgagttcagcccctt
gtctacttaaacccttacctgggagattggaccatcaaagttcgtgttactgacaaggga
aacctgcgtacatacaaaaatgctcaaggagaaggttgtgttttcaatgtggtgttgaca
gatgaagatggtacacaaatacaggcaacgatgttcaatgatgctgcaaggaagttctat
gaaaagttttccctcggcaaagtctattatgtttccaggggaactttgaaagttgccaat
aagaaattcaagacagttcaaaatgattatgaaatgactttgaatgtgaattctcaagta
gacgaggtcagcaatgaagctgcttttgttcctgaaacaaaatataattttgtcaagatt
gatatgttaggtcctcacgtgaatggaagagatctcgttgatgtaattggagttgttcaa
aatgtttcttctacaatgagcattcgaagaaaaatcaacaatgagacagctccaaaacgt
gatgtaaccattgctgatgaaacgaagaagacagttgtgatatctttgtggaatgatctt
gcaaccactgtggggcaggagttgcttgacattgccgaccaatctcctataatcgcattg
aaatatcttagagttggagactttcaaggtgtatctttgtcgacaataagcaggagctca
attacaataaacccagacataaaggaagcacatgatttgagatcatggtatgactctgaa
ggtaaagccgtatccatgtcttctgtaagctccggcctgagcccatcaaccaagagcggt
tctaggtccatgtactctgaccggatttccttatctcatatactcgaaaacaaatctttg
ggagaagaaaagcccacgttctttagcattagagcatatgtcagctttatcaaacccgat
caaacaatgtggtatcgtgcttgcaaaacatgcaacaagaaggtgactgaagccatcgga
tctggatattggtgtgacaattgccagaaaaacgatgaagaatgcagtttaaggtacata
atggttgtgagagtatctgatgcaagtggtgaagcttgggtctctacattcaacgaagaa
gcagagagaattatgggatgctctgctgatgaacttgatcagctcaaatcgcagattggt
gaggagaattcatatcaacttaaactcaaagaagccacatgggttccccacttgtttcga
gttagcgtttctcagaacgaatacaacaatgagaagagacaaaggatcaccgtcaggtca
gttgctccagttgattttgctgctgagtccagatttttgctagaagagatagcaaaaatg
aaagcttcgtaa
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