Cucumis sativus (cucumber): 101208548
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Entry
101208548 CDS
T02486
Name
(RefSeq) nuclear pore complex protein NUP160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101208548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101208548
03036 Chromosome and associated proteins [BR:
csv03036
]
101208548
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101208548
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101208548
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
Nucleoporin_N
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
101208548
NCBI-ProteinID:
XP_011649106
LinkDB
All DBs
Position
2:complement(9219471..9271891)
Genome browser
AA seq
1512 aa
AA seq
DB search
MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD
PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF
LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG
RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISRVKLAGAVQDMVISEVCGRQF
LFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEARFVRLWVGQANTDKSTISLAILYNHP
EDLSLETIYIYSLRFSWGDRVSLLLEPSTHSIPLNQGGCLDVKLAYDKIWVLKDNALIFL
DLLASDGHSGEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAKDEVVPFISSIF
VRRLLQPGVYNERVLRATLLEYSRHRTDSNFQSMTSDELKQEILSLIEDEGATGTPVSIY
LWWKTFCTHYIHHWCTDNAPSFILIDSTSAAVGLVRRNSVSLFRCLDNVEQLLDGFSGEL
DELGGPDIGWIGNDSDSELLFEVLRCVISISRRLGKTTLAIFYESLMSTPIIPFGEIVGK
ILKILESGYSSSVVMVKRSDLQAGCGWEREADKKNFQKFSIDMMLSLHTLCKKGATWGRV
FDVIESFLKYFVPRKMSQKVQPQTSSDANTSILVHATSQISKVMLESALDVLLFLNYMVS
ASGQIGLLHDDTSRVKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDT
YGGKEIWKGKLGKCDFTLASLLLLKMNSSTEGPVYLSTKCLLNPQDIVLATQNFTSWIIW
GSSREPSAFLNTSTELAVVLLRHGQYDAVEYLLSVVKSQSQNEKTSHCMQDVDGGWSIMH
HLLGCCQLGQAHYKLHGPLKERKVHEAICSFFRASSGNRSFQALQSLPHEVGFSSVESSG
CVSSIAWKFHYYQWSMQLFEQYNISKGAFEFALAALELVEEAVSPKDDYCGRLPFNESAI
TVQGRLWANVFKFALDLHQLYDAYCAIISNPDEESKYICLRRFIIVLYECDAIKILCCGE
LPFIGLAEKVEQELVWKAERSDILSRPSLYKLLYAFEIHRHNWQKAASYIYLYSARLKTE
GALGDNHFSSSLVLERLNGLSAAINALHLVHPDFMWIEPLFERDAIQSKHYPSKKAKRTV
DEQLGRDDTKSQKQHSYIDMKQLENEFLLTSSEYVLSLANVKWPFTDSRMSGAHEAPSEL
VDLLVQNNFYDMAFSVIIRFWRDSALKRELERVFTAMSLKCCPSRLGSSAVLIDPRINSL
LLISPNGGGEDVHGSLDALPSSQQTDGNGHWETLEVYLEKYKGLNARLPLIVVETLLRAD
SQMELPLWLVLMFKDGRRPKTWGMTGEESNPALLFRLYVEYGRYTEATHLLLEYMESFAS
MAPADLINRKRPFSICFPYNAVQYLWCKIDELIRSGHMVDACEKLRNLLHGALLNHLKLL
KVEGDDILSAVA
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtaggatgccgttggccggaatggaaacctctatcatggctaccgactctgta
gaattcattggcgtttctgttccttcttcctcatcaagagaggctgccattacttccgtt
gcttctcaagctaccacctcattgactgaggaccatacctcctgcgttgtcgtaggagat
cctccaacctatcttatctggaggattcggaagattctacctcatgtagtagagttgctt
gagttttcaacttccaacgagttttgtaggactggtttgcgaattgcctttcctgaaaca
cttcacccggccgtttttgtttgcaaaaatgagattagttcgtctatgggacatcctttc
ttgatgtatgcagtgacttcgtccggtttcgcttattgtttgaagctgcgaaatctatcc
tcatatgtatcctactctgccattccgctcgatgaggttgtggagtttaatctgcaaacc
catccggacaacaaaccagtaaccagcgtatctgctatatctggatgtcttgtgataggg
agaaatgatggatcagtttcatgttacaaacttgggtcgcttgaccaacattcccctggc
tttgaacatgaactacgagatgattcaggattcaatcgtctgttgggtttcatttcaagg
gtcaagttggcaggagctgtgcaagatatggtaatatctgaggtctgtggaagacaattt
ctgtttgttcttcattctgatggaaacttacgagtgtgggatctttcatgccatagtagg
gtatttaatcactctatgaacattgcaactatggcagaagcaaggtttgttaggttgtgg
gtgggtcaagctaacaccgataagagtacaatttctctggcgattctctataatcacccg
gaggatcttagcttggagacgatctacatatatagcttacgttttagttggggagatagg
gtcagcctattgttggagccttcaacacacagtattccattgaatcagggtggatgtctc
gacgtaaaacttgcatatgataagatatgggtcttaaaggataacgcattgatctttctc
gacttgttagcttcagatggtcattcgggagaagcacaatgctacgctttgcaagaagag
tttgttgctgaccaattatttcagagcgctgattattcttctgatgcagttctttggata
actcattcaatattttcttcggcaaaggatgaggttgtgccgttcatatcttctatattc
gtgcgcagactactacaacctggggtttacaatgaaagggttcttcgtgcaactttgctt
gaatatagtaggcaccggacagattctaactttcaatctatgacttctgatgaactgaaa
caagagattctatctctcattgaagatgagggagcaactggaactccagtttcaatatat
ttatggtggaaaactttctgtacccactacatccatcattggtgcacagataatgcacct
tctttcatacttattgacagtacatcggctgcagtgggattagtgagaaggaattcagta
tcactttttagatgcttggacaatgttgagcaacttttagacggtttttctggggaactt
gatgaacttggtggtcctgacattggttggattggcaatgattcagattcggaactcttg
tttgaggtcttgagatgtgttattagcattagccggcgtttggggaaaacaactttggct
atattttatgagtcactaatgagcacaccgattatcccttttggtgaaattgttggtaaa
attttgaagattctggaaagtggatatagctcgtctgtggtaatggttaaaaggtcagat
cttcaagctggctgtggttgggaaagagaggctgataagaaaaattttcaaaaattttct
attgatatgatgctatctcttcatactttgtgcaaaaagggtgccacatggggcagggtt
ttcgatgtcattgaaagttttcttaaatactttgttccacgaaagatgtctcagaaagta
cagcctcaaacatcatcggatgccaatacctccattttggtccatgcaacctcccagatt
tcaaaggttatgcttgaatcagcgttagatgttctgttgtttctaaattatatggtctcc
gccagtgggcagattggtttactccatgatgacacatcgagagtaaaacttgagttaatt
ccaatgattgaggaaattatttgtgagtggcacattattaatttccttgctatcacgcca
tctgagtcagctgcagttgaggattttagttctcaactttcactgttacaaattgatact
tatggaggtaaagaaatatggaaggggaagcttggaaaatgtgactttacattggcttct
ttacttctgttaaagatgaattcttcaactgaagggcctgtctacctgtctaccaaatgt
cttctcaatccacaggacattgttcttgcaacgcaaaattttactagctggattatttgg
gggagcagtagagaaccttcggcctttttaaatacttcaactgagcttgctgtggtactg
ctgaggcatggccaatatgatgctgttgagtacctgctcagcgtcgtgaagtctcaatca
caaaacgagaagacatcccactgtatgcaagatgtggatggtggatggtctataatgcat
caccttcttggttgctgtcaacttggtcaggcacattataagttgcacggaccactgaaa
gagaggaaggttcacgaagctatatgcagtttcttcagagcttcatctggaaacagatct
tttcaggctttgcagagtttgcctcatgaagtgggattttcttctgttgagtctagtggt
tgtgtatcaagtatcgcatggaaattccattattatcagtggtctatgcaattgtttgag
cagtacaatatcagcaaaggagcttttgagtttgctcttgctgcacttgagctggtggaa
gaagctgtaagtccaaaagacgattattgtggcagacttcctttcaatgaatctgccatt
acagtccaaggacggctttgggcaaatgtcttcaaatttgcgttggatctacatcaactc
tatgatgcgtattgtgcaatcatttcaaatccagatgaggagagcaaatatatctgctta
aggcgtttcataatagtcctttatgaatgcgatgccattaagattctttgttgtggtgaa
ttaccgttcattggattagcagaaaaggtagagcaggagcttgtatggaaggcagaacgt
tctgatattttgtcaaggccaagcttgtataagttgctgtatgcgtttgaaatacaccga
cataattggcagaaagcagcaagttatatctacctttattcggctcgtttgaaaacggaa
ggagctctgggagataaccatttcagttcatcattggtgttggaacgattgaatggcctt
tctgctgctattaatgcattgcaccttgttcatcctgattttatgtggattgaacccctg
tttgaaagagatgctattcagagtaagcactacccaagtaagaaagctaaaagaactgtt
gatgaacagcttggcagagatgacaccaagtctcagaagcagcattcttatatcgatatg
aaacaactagaaaatgaatttttgctaacttcatcagagtatgttctctcattagcaaat
gtcaagtggccatttactgactctcgtatgtcaggggctcatgaggccccttcagagtta
gttgatcttctggtccagaacaatttttatgatatggcattttctgttataataagattc
tggagagattcagcattaaagagggagttggagagagttttcactgccatgtcattgaag
tgttgtcctagtagattaggttcatctgcagttctgattgatcccagaataaatagtctt
ttattgatatcgccaaatggtggaggtgaggatgttcatggttcacttgatgcactgcct
agcagtcagcagaccgatggaaatggccattgggaaactctggaagtttatcttgaaaaa
tataaaggtctcaacgctagattgcctcttattgttgtggaaacgcttctccgagcagac
tcccagatggaattgcctctttggctggttcttatgtttaaggatggtagaaggccaaag
acatgggggatgactggtgaagaatcaaatccagcattgttgtttcgattatatgttgaa
tatggtcgatatacagaggctacccatctgttgctcgaatacatggaatcctttgcatca
atggcaccagcagacttaattaaccgaaaaagaccattctctatttgcttcccctacaac
gccgttcagtacttatggtgcaaaatagatgaattgatccgctcaggtcacatggtagat
gcttgtgagaagctgagaaacctattgcatggtgctttgttgaatcatctgaagctgctt
aaagtcgagggagatgatatcctatctgccgtcgcttaa
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integrated database retrieval system
