KEGG   Cucumis sativus (cucumber): 101208568
Entry
101208568         CDS       T02486                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03030  DNA replication
csv03410  Base excision repair
csv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101208568
   03410 Base excision repair
    101208568
   03420 Nucleotide excision repair
    101208568
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csv03032]
    101208568
   03400 DNA repair and recombination proteins [BR:csv03400]
    101208568
Enzymes [BR:csv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     101208568
DNA replication proteins [BR:csv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    101208568
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      101208568
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 101208568
NCBI-ProteinID: XP_004145799
LinkDB
Position
6:10783991..10817808
AA seq 2206 aa
MSGESRRRGRAEKSSRSKKQRVIRSAEEEIESKLGFDLFSEGDKRLGWLLTFAPSSLEDQ
DTGKVYSCIDLYFVTQDGSSFKSKYKFRPYFYAATKDKMETDVEAYLRRRYEGRIADIEI
LQKEDLDLKNHLSGLRKTYLKLSFDTVQELMNVKSELVHVVENNWAKSDAAEAYDSILFG
KREQKPQDFLECIIDLREYDVPYHVRFAIDHDLRCGQWYDVSVSSTGVTLEKRKDLLQRA
EVHICAFDIETTKLPLKFPDAEYDMIMMISYMVDGNGYLIINRECVGEDIENLEYTPKPE
FEGFFKVTNVKNELELLKLWFSHMREVKPGIYVTYNGDFFDWPFIETRAAYHGFKMSDEV
GFQCDKNQGECRSKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVR
FAMEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM
VQAYKANVVCPNKHQSDPEKFYSNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPSAY
DQLINNLDRDLQYAIQVEGKMELESVSNYSDVKNAIMEKLIRLRDEPVREEGPLIYHLDV
AAMYPNIILTNRLQPSSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHLK
KQIESEFVDSGNVRSSKSFLELPKLEQQAKLKDRLKKYCQKAYKRVLDKPVTEVREAGIC
MRENSFYIDTVRSFRDRRYEYKGLNKVWKGKLTEAKSSGNSIKIQEAQDMVVLYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCA
LPGSFPENFTFKTRDSKKLTISYPCVMLNVDVARNNTNDQYQTLIDPVKKTYKTHSECSI
EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL
FDKFLHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLVDYGEQ
KSCAVTTARRLADFLGDTMVRDKGLRCQYIVACEPKGTPVSERALPVAIFETDAEIMKFY
VRKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKV
REKDDKFRQQKVADMFASSSRVKYSKKNSDVSCSKHAVDEDNSEDLEDFQKKTSSTNGPK
PVVRCYDVKGKKHSLTSDIETNSEMQENFNDGGFEPSSPVDVENIDKNVDYSGWLELKKR
KWKDTLDRRKKQRLVNSRTPLAANNVTRELNGATNNKDAPRTGVGSYFKRHEGSVTRCHW
QILQLVHSPQSGQYFAWAVVEGVMLKIPINVPRVFYLNSKAPITDEFVGRRVNKTLPHGR
HSYNLYEVVTDEGQFRTQRNKLAALLADPEVEGIYESKVPLEFKSIFQIGCVCKVDKTAK
KRNIQDGWSLDELQMKTTTECSYLEKSISFFYVYHSISEGRAIFVTFFPSTRSIFVVVVN
PYQNKDLSSTFLERQFREASQMLSGESQPPKSGITYKVDYVVNIKEAEVILQRSITEHRS
LNHGPTLAVIQCPSVQRLKSGVRVLDDFPCVTIPSNARDNQYQVLGWQQTAAKIGMQRCA
ASSQWLNERISLARYAHVPLGNFELDWLIFTADIFFSRALHDQQQVLWISDDGVPDIGGI
NIEDVCFADEVQQPILTYPGAYRKVSVEFKIHHLAVNALLKSNQVNEMEGGSLFGFERDI
QCGAQFSNEEGGFDEAASCAPAFRVLKQLIQRCLTDAVTSGNVYADAILQHLYRWICSPQ
SKLHDPALHRLFHKVMQKVFALLLAELRKLGATIIFSNFSRIIIDTGRFDLSSAKAYCDS
LLKTVKTRDLFEWIELEPLQFWQSLLFMDKYNYGGIRAKDDESTDVESQVDIVANWNIAE
YLPKKIQDHFDFIISQFLYIPWDYATKQAAARASLQRDDTCTPSITVLAAESFESHVTEH
LKEQLSSYFSDKMLGIVRDIVLHMKGKEKNTQDGLPEQPPGNIYKGDAALEFIKLVCSVL
AIDQNVQHDVLVMRKNLLKFVRVREFAPEAEFSNSSPSIILPNVICSYCDDCRDLDLCRD
SALLAQEWRCAVPQCGQPYDQEEMENKLLQIVRQRERLYHVQDLVCIRCKQVKAAHLSEQ
CSCAGSFKCKEDAAEYFSKMLVLLNVATRQKFQLLQEFTTWILENS
NT seq 6621 nt   +upstreamnt  +downstreamnt
atgagcggcgaaagccggcggcgaggccgtgccgaaaagagtagtaggtcgaagaagcag
agggtaattcggtcagctgaggaggagattgaatcaaagcttggatttgatctcttctct
gaaggtgataaaaggcttggatggttgcttactttcgctccttcatctttggaggatcag
gatactggaaaggtctatagttgtattgatctttattttgtgacacaggatgggagcagt
ttcaagtcaaaatataaatttcgtccttatttctatgcagccacaaaggataaaatggaa
actgacgtggaggcatatttgagacgccgttatgaaggtcggatagctgatattgagatt
ttacaaaaagaagaccttgatcttaagaatcatctttcaggattgcgcaagacatatttg
aaactatcatttgacactgttcaagaattgatgaacgtgaagagtgaactagtgcatgtt
gttgaaaacaactgggcaaagtctgatgctgcagaagcatatgattctattttatttggt
aaaagggaacaaaagccacaagattttctagaatgcattattgatcttcgagagtatgac
gttccttatcatgtccgctttgctattgatcatgatttacgctgtggacaatggtacgat
gttagtgtttcaagtactggtgttacattggagaagagaaaagatcttctgcaacgtgct
gaagttcacatatgtgcatttgatattgaaaccacaaagctaccattgaaattcccagat
gctgaatatgatatgataatgatgatttcctatatggttgatggaaatgggtacttgatt
atcaatagagagtgtgttggagaagatattgagaatttggagtacactccaaaaccagaa
tttgaagggttctttaaagtcaccaacgtgaaaaatgagttagagcttctcaaactgtgg
ttttcccatatgcgagaggtgaaacctggaatttatgtcacttacaatggtgattttttt
gactggccattcattgaaaccagagcagcttatcatggctttaagatgagtgatgaagta
ggatttcaatgtgacaagaatcagggggaatgccgttcaaaatttgcttgtcatttggat
tgctttgcttgggtaaagcgtgatagttatctacctcagggtagccatggtttgaaggct
gtcacaaaagctaaattgggttatgatcctcttgaagtgaatcctgaggatatggtgcgg
tttgcaatggaaaagcctcagatgatggcttcctattctgtttcagatgctgttgctaca
tactacttgtacatgacctacgttcatcctttcatattttctttagcaactattattcca
atgtcaccagatgaggtgttgcgcaagggaagtgggacactttgtgaaatgcttctaatg
gttcaggcttacaaggctaatgtcgtgtgtcctaacaaacatcaatcagatccagagaag
ttctacagcaaccggcttcttgaaagtgagacttacattggtggtcacgtagaatgcctc
gagagtggtgtatttagatctgatcttcctaccagttttaggcttgatccatctgcttat
gatcaattgataaacaatttggatagagatctgcaatatgccatacaagtagaaggaaag
atggaattggagtcggtgtcaaattatagcgatgtgaagaatgctatcatggaaaagctc
attagattgcgggacgagcctgtacgcgaagagggccctctgatatatcaccttgatgtg
gcggcgatgtatcctaatattattttaacaaatagacttcagccatcatcaatagtcaca
gatgaggtttgtactgcttgtgatttcaatcgtcctgggaaaacttgcctacgaaaactt
gaatgggtttggcgtggagaggtattcatggctaaaaaaagtgactattatcatctgaag
aagcaaattgagtctgagtttgttgatagtggtaatgttcggtcgtcaaaatcatttctt
gaacttccaaagttggagcagcaagcaaagctcaaagatcgtttaaagaaatactgtcag
aaggcttataaacgagtacttgataagccagtcactgaagttcgagaagcagggatttgc
atgagagaaaactctttctatatcgacactgttcgtagttttcgagatagaaggtatgaa
tacaaagggctcaataaagtatggaagggaaaattaaccgaagctaaatcaagcggaaat
tcaatcaagatccaggaagcccaagacatggtagttctttatgattctctacaactggct
cataaatgtatcctcaactccttttatggatatgtgatgcgaaagggagcacgatggtat
tcgatggaaatggctggtgtagttacatatacaggagcgaaaataattcagaatgctcgt
ctgttaattgagaaaattggaaaaccactggagttggacactgatggtatctggtgtgct
ctacctggatcgttcccagagaattttaccttcaaaacaagagattcgaagaagttgacg
atttcatatccatgtgttatgcttaatgttgatgtggcaaggaacaacacgaatgatcaa
taccagacgcttatagatcctgtgaagaaaacatataaaacacacagcgaatgctcaatt
gaatttgaagtagatggaccatataaggcaatgatcctccctgcttccaaggaagaaggc
attttgatcaagaagagatatgctgtcttcaatgatgatggaacacttgcggagctaaaa
ggctttgagatcaagcgtaggggggagttaaagctcatcaaagttttccaggcagaactt
tttgacaagtttcttcatggttccacattagaggaatgctattcagttgttgcgtctgtt
gcaaatcgatggcttgatcttctagataatcaaggaaaagatattgcagatagtgagttg
cttgattatatatctgaatcaagtaccatgagcaagtctttggtagactacggggaacaa
aagtcttgtgctgttaccactgccagacgtcttgcagactttcttggtgatacaatggtc
agggataaaggcctacgttgtcaatacatagttgcatgtgaacctaagggtactcctgta
agtgagcgtgctcttccagttgcaatctttgagactgatgcagagataatgaaattttat
gtacgtaaatggtgcaaaatttcatctgaagtcggcatccgatccatcattgactggtcc
tactacaagcaacgcttaagctcagcaattcaaaagattataacaattccagcagccatg
caaaaggttgcaaatcctgttcctagggtggtccatcctgattggttacataagaaagtt
cgagagaaggatgataaatttcggcaacagaaagttgctgatatgtttgcatcctcgagc
agagttaaatattcaaagaagaatagtgatgttagctgcagcaaacatgctgtggatgaa
gataattctgaagatttagaagattttcaaaagaaaacaagttctacaaatggccccaaa
ccagttgtccgatgttatgatgtcaaaggcaagaaacattcacttacgagcgatattgaa
acaaactccgaaatgcaggagaattttaatgatggaggatttgagccttcttcacccgtg
gatgttgaaaacatagacaaaaatgtagattacagtggatggcttgaattgaagaagcga
aaatggaaggatactttagacaggaggaagaagcaaaggttagtaaattcaaggactcca
cttgctgctaataatgttacaagggagttaaatggtgctacaaataataaagatgctcct
agaacaggtgttggttcatattttaagaggcatgaaggatctgtaactcgctgccattgg
cagattttacagcttgttcatagtccacagagtggccaatattttgcttgggctgtcgtg
gaaggagttatgctaaagatccctattaatgttcctagagttttttaccttaattctaaa
gcacctattacagatgaatttgtgggcaggcgtgtgaataaaactcttccccatggaagg
cacagttataacctgtatgaggttgtgactgatgagggtcaatttaggacacagaggaat
aaacttgcagccctacttgcggatccagaagtagagggaatctatgaaagcaaggtacca
ttagagttcaagtccatctttcagattggctgtgtctgtaaagttgataaaactgctaaa
aagcgaaacattcaagacggatggagtctggatgaactgcaaatgaagactacaacagaa
tgcagttatctggaaaagtcaatctctttcttctatgtgtatcatagcatttccgaagga
agagctatcttcgtcaccttttttccctccacaaggtcaatatttgtggtcgtggttaat
ccttaccagaacaaagacttgtcatcaacttttcttgaaaggcaatttcgtgaagcttct
caaatgctgtctggtgaatcacaacctcctaagagtggtataacttacaaggtagactat
gttgttaacatcaaagaagctgaagtgattttgcaaagatcaataacagaacacaggagc
ttaaaccatggacctactctagctgtaattcaatgcccaagtgtacaacggctgaagtca
ggtgtgagagtattagatgattttccatgtgtgaccatcccttctaatgctcgtgataac
caatatcaggttcttggttggcaacaaacagctgcaaagattggaatgcaacgctgtgct
gcatcatcccaatggttgaatgagagaatctctcttgcaagatatgcccatgtaccatta
ggaaattttgaacttgattggttaatttttacggcagatatatttttttcaagagcatta
catgatcaacaacaggtactttggatatccgatgatggtgttccagacataggaggcatt
aacatagaagatgtgtgtttcgctgatgaggtccaacaacctattctgacgtaccctgga
gcatatagaaaagtttctgtggagtttaagatccatcatttggctgtcaatgctctgctg
aagagcaaccaagtgaatgaaatggaaggaggcagtttgtttggctttgaacgtgatatt
caatgtggggctcaattttctaatgaagaaggtggctttgatgaggctgcttcatgtgct
ccggcatttcgtgtcctgaaacaattgatacaaaggtgtcttacagatgcagttacatct
ggaaatgtatatgctgatgcaattttgcagcatctgtacagatggatttgcagcccccag
tcaaaacttcacgacccagctcttcatcgtttgttccacaaggttatgcaaaaggtgttt
gctcttttgttggctgagctacgcaaattaggcgccaccattatattttcaaacttctca
agaattattatagacacgggaaggtttgatctctcttctgccaaagcatactgtgatagc
ttgctgaaaacagtgaaaacaagggatctgttcgagtggattgagctggaaccattacag
ttctggcagtccctgttgtttatggataagtataactatggtggaatccgggcaaaagat
gatgagagcacagatgttgaatctcaagttgatatagtggccaactggaacattgccgag
tatctgcccaagaagattcaggatcactttgattttatcatctcccagtttttgtatatt
ccatgggattatgcaaccaagcaagctgcagcaagagcatcattgcagcgtgatgacaca
tgtaccccatccattactgttttagctgctgaatcatttgaatcacatgtgacagaacat
ctgaaagaacagctaagctcttacttcagtgacaaaatgttgggaattgttcgggatatt
gttcttcatatgaaagggaaggagaagaacacccaggatggtttgccagaacaacctcct
ggtaatatctacaaaggagatgctgctttggaattcattaagctcgtctgctctgttttg
gcaattgatcaaaatgtccagcatgacgttctggtaatgaggaaaaatttactgaagttc
gtgcgtgtaagagagtttgcccccgaagctgagttttctaattccagcccgtccataatc
ttgcccaacgttatttgcagctattgcgacgattgtcgagatctggacttgtgccgcgac
tcagctttactagcacaggaatggcgctgtgctgtgccacaatgtggacaaccgtatgac
caagaagagatggagaataagctgcttcaaatcgtgcgacagagggagcgtctctatcac
gtgcaggatctggtatgcattcgttgcaaacaagtcaaagcagctcatttatcggaacaa
tgtagctgtgccggttcatttaaatgcaaagaagatgcggcagaatatttcagcaagatg
cttgttcttcttaatgtagccactcgtcagaagtttcaactactgcaagagttcaccacg
tggatcttagaaaactcatga

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