Cucumis sativus (cucumber): 101208584
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Entry
101208584 CDS
T02486
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform X2
KO
K03093
RNA polymerase sigma-I factor
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101208584
Transcription machinery [BR:
csv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
101208584
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
101208584
NCBI-ProteinID:
XP_011651413
UniProt:
A0A0A0LCQ9
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Position
3:19086331..19090697
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AA seq
547 aa
AA seq
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MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN
NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD
GRSKRGQKRSKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRKQKDTKN
EADEIDGLLLNLEKRIALKSNKEGKAVPSLRKQKETKNEDDEIDRLVRDYSASTDLVSLD
WKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGLGREPTEGELANATNMNVIQVR
RQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKR
KFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELHRLPTEGEIT
AKVGISQERYLEVMRATKPVYSLHSRHSTTSEELINGITDVEGTGGDNRRQPALLRLALD
DVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD
YLRRYLI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttcaagcgctgcagcacgaactccttttcggctgggtgtgaaa
ttttctaatcacagttctacattgaaaagaccatcgattgttgcttttaaagcagataag
cacacaaacacgacactggtctcaccccacgagcaagtaacattgcctgtggagagtaat
aacagaaggaagaaaagatcaggaaatactagcaaaccgttgaagagagttaaagctgtc
cttatagatgaagctactccatgttctctggatttggattacaatgaggctgctgctaaa
cttgaaaacattttcaagcttagccctatgactgaggattctgataaggagtgtaaagat
ggcagatcaaaaagaggacagaaaaggagcaaaaaatcagccaatagaccaggtgatggc
attgtcaggaaccaaactaagaggattaagcgactagatctcgataaaaggattgcattg
aaaaacaaaaaggaaggcaaagcggttgctttattaaggaaacaaaaagatactaaaaat
gaagctgatgagattgatggtctgctattaaatcttgaaaagaggatagcattgaaaagt
aacaaggaaggaaaagcggttccttcattaaggaaacagaaagaaaccaaaaatgaagat
gatgagattgataggcttgtaagagactactctgcttcaactgatttggttagcttagac
tggaagaaaatgaagattcctcctgttcttccttcatcagagcatacccgcttgttcaag
ttggtccagccaatgaaggcacttgttgaagtacaagaggagctgcagaaagggttagga
agagaaccaactgaaggggaattggcaaatgcaacgaatatgaatgtaattcaagtaagg
agacaactggaggtcggtcgtgctgccagaaataagctcattaagcacaatctacgcctt
gtattatttgtaatcaacaaatactttgaagattttgcaagtgggccaaaatttcaagac
ctttgtcaagcaggagtcaagggactcattacagcaattgatcgatttgagccaaagagg
aaatttcggctatcgacttatgctttattttggataaggcatgctattatccggtcaatg
actctgtcaagcttcacacgtgtctcatttggacttgattcggtaagagttgaaattcaa
agagctaaacttgagttattatgtgagcttcatagattaccaacagagggagagataact
gcaaaagttggcatctcacaagagaggtacctagaagtaatgagagctacaaaaccagtt
tactctctccattcaaggcactcaactacatcggaagagttgatcaatgggatcactgat
gtagaaggcacgggaggtgacaaccgaaggcaaccagctcttctgaggcttgctttagac
gatgtgcttgattctcttaagccaaaggagagcttggtgatcagacagagatacggtctc
gatggcaaaggaaaccgaacattaggtgagatagccggaaatctaaatatttcaagggaa
atggttcgaaagcatgaagtgaaagctctcatgaagctgaagcatcctgcaagagtcgat
taccttcgtaggtatttaatctga
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