KEGG   Cucumis sativus (cucumber): 101208613
Entry
101208613         CDS       T02486                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03420  Nucleotide excision repair
csv04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101208613
  09124 Replication and repair
   03420 Nucleotide excision repair
    101208613
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csv04121]
    101208613
   03400 DNA repair and recombination proteins [BR:csv03400]
    101208613
Ubiquitin system [BR:csv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     101208613
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101208613
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101208613
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 101208613
NCBI-ProteinID: XP_004135539
LinkDB
Position
1:22931981..22949814
AA seq 1093 aa
MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTAQGLQPMLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDTESSELITRAMGDVSDRIGRPTDSGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSRPTIVVL
YQDNKDARHVKTYEVVLKDKDFVEGPWSQNNLDNGAAVLIPVPPPLCGVIIIGEETIVYC
SATAFKAIPVRPSITRAYGRVDADGSRYLLGDHAGLLHLLVITHEKERVTGLKIELLGET
SIASTISYLDNAFVYIGSSYGDSQLVKLNVQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
FISETRILAMNLEDELEETEIEGFNSQVQTLFCHDALFNQLVQVTSSSVRLVSSTTRELL
NEWNAPSNYSINVATANASQVLLATGGGVLVHLEICDGLLVEKKHIQLEHEISCLDINPI
GDNPNCSQLAAVGMWTDISVRIFSLPDLNLLTKEQLGGEIIPRSVLLCTFEGISYLLCAL
GDGHLLNFILNTNSNSNSCELMDRKKVSLGTQPITLRTFSSKNATHVFAASDRPTVIYSS
NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHAR
RICHQEQSRTFAICSLRYNQSGTEDTEMHFIRLLDDQTFESISTYALDTYEYGCSILSCS
FSDDNNVYYCVGTAYVMPEENEPTKGRILVFVVEEGKLQLIAEKETKGSVYSLNAFNGKL
LAAINQKIQLYKWTLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK
HEEGAIEERARDYNANWMSAVEILDDDIYLGAENYFNLFTVRKNSEGATDEERSRLEVVG
EYHLGEFVNRFQHGSLVMRLPDSDVGQIPTVIFGSVNGVIGVIASLPHDQYVFLERLQSN
LRKVIKGVGGLSHEQWRSFNNEKRTAEAKNFLDGDLIESFLDLNRSKMEEISRAMSVSAE
ELCKRVEELTRLH
NT seq 3282 nt   +upstreamnt  +downstreamnt
atgagcgtctggaactatgtcgtcaccgctcacaaacccaccaacgtcactcactcctgt
gtcggcaacttcaccggccctcaggagctcaacctcattatagcgaaatgtacccgcatt
gaaattcatttgctcactgctcaaggcctgcagcctatgttggatgttcctatatatgga
aggattgcaacactagaactttttcgccctcacggggaagcacaagattttcttttcata
gcaactgagcggtacaagttctgtgttcttcaatgggatactgagagttctgagcttatt
acaagggcaatgggggacgtctcagatcgcattggtcgtcctactgacagtggtcagatt
ggtattatagacccagactgtagattgattgggcttcatttatatgatggtctattcaag
gtaattccttttgacaataaagggcagctcaaagaagcatttaacattaggcttgaggaa
cttcaagttttggacatcaagtttctttatggatgttcaagacctacaattgtagttctt
taccaggataacaaagatgctaggcatgttaaaacctatgaggtcgttctaaaggataag
gattttgtcgaaggtccgtggtcccaaaacaatcttgataatggagccgctgtgctaata
cctgtgcccccaccactatgtggtgtcattattattggagaagagacaattgtttactgc
agtgccacagcatttaaagcaatacccgttagaccttctatcaccagggcttatggaagg
gtcgatgctgatggttcaaggtacttgcttggtgatcatgctggtctacttcacctgctt
gtcataactcatgaaaaagaaagggtgactggacttaagattgagttgttgggggaaaca
tctattgcttctacaatatcatatcttgataatgcttttgtatatattgggtcaagttat
ggggattcacagcttgttaagctaaatgtacaacctgatgcaaaaggatcatatgtagaa
gttttggagaggtatgtcaacttggggcccattgttgatttttgtgtggtagaccttgag
aggcaaggccaagggcaggttgtaacatgctctggagcgtataaggatggttctcttcgt
gttgttcgtaacggaattggaattaatgagcaggcatctgtggaactgcaaggaataaaa
ggaatgtggtcactgagatcttctactgacgatccatttgatacatttctcgttgtaagc
tttatcagtgagactagaattttggcaatgaatcttgaggatgaattggaggaaacagag
atagagggtttcaactctcaagtgcaaacattgttttgccatgatgcactgtttaatcaa
cttgttcaggttacttcaagctctgtaagattggttagttctaccactagagaacttctc
aatgaatggaatgcgccatcaaactactctatcaatgttgccactgctaatgcctcccag
gttttattggcaactggcggcggcgttttagttcatttagaaatttgcgatggattattg
gttgaaaagaaacatatacagttggagcatgagatttcatgcctcgacataaacccaatt
ggtgacaaccctaactgtagtcaacttgctgctgttggaatgtggacagatataagtgtc
agaatattttctttacctgacctgaatctccttacaaaggaacaattggggggagagata
atacctcgttcagttcttctgtgtacttttgaagggatatcttacttgctgtgtgccctt
ggagatggccatctgttgaactttatattgaacacaaattcaaattcaaattcttgtgag
ctaatggataggaaaaaggtttcccttggaacccaacctataacactccgcacattttca
tccaagaatgctacgcatgtatttgctgcatcagatagaccgacagtcatttacagcagt
aacaagaaactactttacagcaatgttaatctgaaggaagttagccatatgtgtcctttc
aattctgctgcttttccagacagccttgcaattgcaaaggaaggagaactcacaattggt
accattgatgatattcaaaagcttcatatccggtctatcccacttggggagcatgcacgc
cgtatctgccatcaggaacagtccagaacatttgccatttgcagtttgagatataatcaa
tcaggcacagaagacactgaaatgcattttattcgcttgttagatgaccaaacctttgag
tccatttcaacctatgctctcgacacttatgagtacgggtgttctattcttagctgctct
ttctcagatgacaataatgtatattactgtgttggaactgcctatgttatgccggaagaa
aatgaaccaaccaagggccggatattggtttttgttgttgaggaaggcaagctacagctt
attgctgagaaagaaactaagggatctgtttattccttgaatgccttcaatggaaagctg
ctggctgctattaaccagaaaattcaattatacaagtggacgcttcgagatgatggtact
cgtgagttacaatctgaatgtgggcaccatggacatatacttgctctctatgtgcaaacc
cgtggagatttcattgttgttggtgatttgatgaagtccatatccctgttaatctacaag
catgaggagggtgctattgaggagagagcccgggactacaatgcaaattggatgtcagca
gttgagattctcgacgacgacatttatcttggtgctgaaaattacttcaacctcttcact
gttcgaaagaacagcgaaggagcaactgatgaggagcgcagccgcctagaggtggttggt
gaataccaccttggtgaatttgttaaccggttccaacatggctccctcgtaatgcgttta
ccagattctgacgttggtcaaattccaacagtcatttttggctctgtcaatggcgttatt
ggggtcattgcttcacttcctcatgatcaatatgtattcttggagaggctccaatccaac
ttgaggaaagtgatcaagggtgtgggaggactgagccatgagcaatggaggtctttcaac
aatgagaaaagaactgcagaagcaaaaaatttcttggatggagatctaatagagtcattc
ctcgacctcaaccgcagtaaaatggaagaaatttctcgggcaatgagtgtttcggccgag
gagctttgcaagagagtagaagaattgacaaggttacattga

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