Cucumis sativus (cucumber): 101208697
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Entry
101208697 CDS
T02486
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00450
Selenocompound metabolism
csv00970
Aminoacyl-tRNA biosynthesis
csv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
101208697
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101208697
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csv01007
]
101208697
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csv03016
]
101208697
Enzymes [BR:
csv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
101208697
Amino acid related enzymes [BR:
csv01007
]
Aminoacyl-tRNA synthetase
Class I (U)
101208697
Transfer RNA biogenesis [BR:
csv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
101208697
Prokaryotic type
Other AARSs
101208697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
C1_1
CoV_peptidase
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
101208697
NCBI-ProteinID:
XP_004138937
UniProt:
A0A0A0LN88
LinkDB
All DBs
Position
2:complement(8359591..8366651)
Genome browser
AA seq
804 aa
AA seq
DB search
MGDHSGKAAGANASKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRG
YNAIYICGTDEYGTATETKAMEEKCSPKEICDKYHAIHKEVYNWFGISFDEFGRTSSPQQ
TEVCQAIFGKLLENNWLSENTMQQLYCDTCERFLADRLVEGICPTPGCEYDSARGDQCEK
CGKLLNPTELQDPRCKVCQTTPRIRDTNHMFLELPLLREKLEEYINKMSVAGSWSQNAIQ
ATNAWLKEGLKPRCITRDLKWGVPVPLERFKDKVFYVWFDAPIGYVSITSCYTNEWEKWW
KNPENVELFQFMGKDNVPFHTVMFPSTLLGTGEDWTLMKTISVTEYLNYEAGKFSKSKGI
GVFGNDAKDTNIPVEVWRYYLLANRPEVSDTLFTWADLQAKLNGELLNNLGNFIHRVLSF
IAKPLGQGYGSIIPDVPDVVSHELTLSLADKVGKYVDQYMESMEKVKLKQGLKAAMAISS
EGNIYLQTAQFWNLYKADKPSCDIVMRTSAGLVYLLACLLEPFIPSFSLEVFRQLDLPLE
RHISLCEEKGDIETVKQPWKILPSGQKIGTPEPLFKELKDEEVELYRDKFAGSQAQRIVR
AEAEAEKLAAQLKKTNVSGGGKKQQAKSTGGKQKAAVEQEITITRLDIRVGLITKAQKHP
DADSLYVEEIDVGESQPRTVVSGLVKYIPIEEMQNRKVCVLCNLKPATMRGIKSQAMVLA
ASNSDHTKVELVEPPKEAKVGERVKFGGMEGDADDVLNPKKKVWETLQVDLCTNGDLVAC
FKDIPFTTTAGICKVSSISNGSIR
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaccattcaggcaaggccgccggagccaacgcttcaaagcttccgattccagga
aagaggaatattctcatcaccagcgctcttccatacgtcaataacgttcctcacctcgga
aacatcattggctgtgtgttgagtgctgatgtttttgctcgatactgtcggcttagaggt
tataacgctatttacatatgcggaaccgatgagtatggaacggcaacggagacaaaagca
atggaagagaaatgctctcctaaagagatttgtgacaagtatcacgcaattcacaaagaa
gtttataattggtttggtattagtttcgatgagtttgggcgcacatcatcgccacagcag
acggaagtttgtcaagcaatatttggcaaactattggagaacaattggctttctgagaac
acaatgcaacagctatactgtgatacgtgtgagagatttttagctgatcggcttgttgaa
ggcatatgtcctactccaggttgcgagtatgactctgcacgtggtgatcagtgtgagaag
tgtgggaaacttctaaatccaactgaattgcaagaccctaggtgcaaggtctgtcaaaca
accccacgtatccgtgacacaaaccacatgtttcttgaacttcctttgctgagagagaaa
ctggaagaatatatcaacaagatgtctgtggctggatcttggagccaaaatgctattcaa
gcaacaaatgcttggcttaaggaagggttgaaacctcggtgtattacaagagatcttaag
tggggggttcccgttccacttgaaaggttcaaggacaaggttttctatgtctggtttgat
gcacctataggatatgtctccattacatcatgctacacaaatgaatgggagaagtggtgg
aagaatccagaaaatgtagagctttttcaatttatgggaaaggataacgtgccttttcac
acggttatgtttccttccactcttcttggaactggagaagactggaccttaatgaaaacc
attagtgttactgaatatttaaactatgaagcaggaaaattttctaaaagcaagggcata
ggagtttttggtaatgatgcaaaagatacaaatattcctgtagaagtgtggagatactac
ttactagcaaataggcctgaggtgtcagatacattatttacatgggctgatttacaagca
aaactcaatggtgagttgctgaacaatttgggcaacttcattcatcgagttttgagcttc
attgccaaacctttagggcagggttatggttccattattcctgatgttcctgacgtggta
tctcatgagttaacattgagtttggctgacaaagttggtaaatacgtagaccaatatatg
gaatcaatggagaaggttaaactaaaacaaggtctgaaagctgcaatggctatttcaagt
gagggaaatatatatttgcaaacagcacagttctggaatctttacaaggcggacaaacct
tcctgcgatattgttatgagaacttcagctggactagtatatcttctagcatgtttatta
gaaccattcataccttctttctcactggaggtgtttaggcagctggatttacctctggaa
cgacatatttccctttgtgaagaaaagggagacatcgagacagtaaaacaaccttggaag
atcctaccttctggtcaaaagattggcacaccagagccattgttcaaagaattgaaagac
gaagaagtagaactatacagagacaagtttgctggaagtcaggctcaacgcattgtcaga
gcagaagctgaagcagaaaagcttgctgctcagcttaagaaaactaacgtctcaggcggt
ggaaaaaagcaacaggcaaaatctacaggtgggaaacagaaagctgctgtggaacaagaa
attacaattacgagactggatatacgtgttgggttaattacaaaagctcagaagcatcct
gatgctgattccttatacgtggaagaaattgatgtgggagaatcgcaacctcgaactgtt
gtgagcggattagtgaagtacatacccattgaagagatgcagaaccggaaggtgtgcgtt
ctttgcaacttgaagccggcaaccatgaggggcattaaatctcaagccatggttcttgct
gcttccaatagtgaccataccaaggtggaattagtggagccaccaaaagaggcgaaggtt
ggagaaagggtaaaattcggaggaatggaaggggatgcggacgatgtattgaacccaaaa
aagaaggtatgggagacgctgcaggttgatttgtgtaccaacggagacctagtggcgtgt
tttaaagacattccctttaccacaactgcgggtatttgcaaagtttcttccatttccaat
ggttccatcaggtaa
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