Cucumis sativus (cucumber): 101208724
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Entry
101208724 CDS
T02486
Name
(RefSeq) cleavage stimulation factor subunit 77
KO
K14408
cleavage stimulation factor subunit 3
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101208724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101208724
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101208724
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_15
TPR_YpiA
TPR_16
TPR_2
TPR_CcmH_CycH
CFAP70_mid_TPR
Iml2-TPR_39
NRDE-2
TPR_Slam
ANAPC16
TPR_8
DUF1993
Motif
Other DBs
NCBI-GeneID:
101208724
NCBI-ProteinID:
XP_011653953
LinkDB
All DBs
Position
4
Genome browser
AA seq
765 aa
AA seq
DB search
MASEGSDSKDKTTSNKLLDGLKYNVEVAESVANEAQRLPILEATPLYEQLLTVYPTAAKY
WKQYVEAHMVVNNDDATRQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAF
DFMLSYLGVDISSGPVWMEYIAFLKSLPALSSQEESHRMTAVRKVYQKAIITPTHHIEQL
WRDYENFENSVSRQLAKGLVSEYQPKFNSARAVYRERKKYVDEIDCNMLAVPPTGSSKEE
LQWMSWRRLIAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYAMWHASNGSI
DAAIKVFQRALKALPDSDMLKFAYAELEESRGSLQSAKKIYESLLSDGVNATALAHIQFI
RFLRRNEGVEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKIAHNVFEDGMKRFMN
EPTYILKYADFLARLNDDRNIRALFERALSTLPLEESAEVWKRFIHFEQTYGDLASMLKV
EKRRKEALSQTGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQEWLAKNISKNS
EKSSLPGGTGFLDTGSAGFMSHSIPSTKVVYPDTSQMVIYDPSQILGILPTATASGLPAN
PSNPVSVASGAPTSVFDEILKATPAALIAFLANLPAVDGPTPDVDIVLSVCLESDLPTVP
LVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKDYDRQEDNESTT
VQSQPMPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagagggatctgattcaaaggataaaacaactagcaataagcttctggatggt
ttgaagtacaatgttgaagtggcagaaagtgttgctaatgaggcgcagcgtttgccaata
ttggaggcaacaccattatatgagcaactgctgactgtgtatcccactgctgctaaatat
tggaagcaatatgtcgaggcacacatggttgtaaataatgatgatgctacaagacaaata
tttagccggtgcttattgaactgtctacacatccctctttggcgctgctacatccgattc
attaagaaggtgaatgaaaggaaaggaatggaaggccaggaggaaaccagaaaagctttt
gattttatgcttagctatcttggtgttgacatttcttctggccctgtgtggatggaatac
attgccttcttaaagtcactgccggctcttagctcgcaggaggagtcacatcgtatgact
gcagtgcggaaggtctaccagaaagctattatcactcctacccatcacatcgagcaactg
tggagggactatgaaaattttgagaattctgtcagccgtcaactggccaagggactagtg
tctgaatatcaaccaaaatttaatagtgctcgagctgtctacagagagaggaagaaatac
gttgatgagattgattgcaacatgcttgctgtaccaccaactggctcctcaaaggaagag
ctgcaatggatgtcatggagacgactaatagcgtttgagaaaggaaatccccagaggata
gacagtgcatcatccaacaaacgaattatattcacatatgaacagtgtcttatgtacctg
taccattatcctgatgtatggtatgattatgctatgtggcatgcaagtaatggatcaata
gatgctgcaattaaagtatttcagcgagctttgaaggctcttcctgactcggatatgcta
aaatttgcttatgctgaattagaagaatctcgtggatcacttcagtccgcaaagaaaata
tatgaaagccttttgagcgatggtgttaatgcgaccgcactagctcatattcaatttatc
cgtttccttagaagaaatgaaggagttgaggctgctcgcaagcattttttggatgctcgc
aaatccccgaactgcacatatcatgtttatgttgcttatgctatgatggccttttgtctc
gacaaggatcccaagattgcacataatgtttttgaagatggaatgaaacggtttatgaat
gaacccacgtatattcttaaatatgcagatttccttgctcgcttgaatgatgacagaaat
attcgagctttatttgagcgtgctttgagtaccttgcctctagaggagtctgctgaggtt
tggaaacgcttcatccattttgagcaaacttatggagacctggctagcatgctgaaggtg
gaaaaaagaagaaaggaagctctttcccaaacgggtgaagatggagcatcaacattggaa
agttcattgcaagatgttgtgtcccggtatagttttatggatctctggccgtgcacatca
agcgatctggataatttgaccagacaagagtggcttgctaagaacataagtaagaactca
gaaaaatctagtcttcctggtggaactggcttcttagatactggttctgctggttttatg
agccattcaattccatctacaaaggttgtttatcctgatacctctcagatggtgatttat
gacccaagccaaatattaggaattcttccaactgcaacagcttcaggacttccggctaat
ccgtcaaatccagtttctgttgcaagtggagcaccgactagtgtatttgacgaaatatta
aaagcaacaccggctgcattaatagcatttcttgcaaacttacctgctgttgatggtcca
actcccgacgttgatattgtactatcagtttgtcttgagagtgatctacctacagttcca
ttggtcaaatcaggggcaacaccagcacaagtttcgggtggtcctgtacctaccactagt
gacctttctggttcaagcaagtctcatgcattttccaattcctccctaaagcataccaga
gacaagcaatcaggaaagagaaaagattacgacagacaagaggacaatgaaagtacgaca
gtccaaagtcagccgatgcctaaagattttttcaggataagacaaatccagaaagcaaga
ggagctacttcttcccaaacaggttctgcttcctatggaagtgctatttctggagatctc
tctggtagcactggctga
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