Cucumis sativus (cucumber): 101208989
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Entry
101208989 CDS
T02486
Name
(RefSeq) protein RNA-directed DNA methylation 3 isoform X1
Organism
csv
Cucumis sativus (cucumber)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
Spt5-NGN
KOW
KOW5_SPT5
KOWx_SPT5
Motif
Other DBs
NCBI-GeneID:
101208989
NCBI-ProteinID:
XP_031736955
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All DBs
Position
2:complement(16054873..16079180)
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AA seq
1689 aa
AA seq
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MASKGKGIANDSSSGERKLRDDNTSSAARKRRDRSVLQFFEDVAPEVGGESDNSDFFDDL
MDMEDNLGTLPTFKNDDAKAQDIPFFPKEEEMNEEEFDRIMEEVYNRAPGLGAFAEENYE
NKNSTGRNPPAQSARDTISLWKVKCMVGRERQSVFCLMQKFVDLHSFGNKLQIKSAFCVE
HVKGFIYVEAPRQYDLIEACKGITGIYSTRVASVPENDISQLLSVRSRVSEVTVGTMARV
KNGKYKGDLAQIVAVNNARKRATVKLVPRIDLQAMAEKFGGGAAAKKTANPAPRLINSSE
LAEFRPLMQFRRDRETGKLFEFLDGMMLKDGYLYKKISLDSLSCWGVMPSEDELLKFKPS
ESNESNDLEWLSQLYGEKKKKKKKVVTTEKGGGKGEGSSGSSSTSSFGDHNLVCFGRKDF
GMILGTSEKDDSYKILKDSPDGSVVVNVQRKELKSGALDAKFTAADHNGKIISVSDNVKV
LEGSLKDKQGIVKHVYRHTLFVYDENEVDNDGYFCCKSNMCEKIKISYDVPGGKEDDKGF
SGFEDFSSSPKSPLSPKKPWAEKETGREYNRDDRADGMFSIGQTLRIRVGPLKGYLCRVI
AVRKRDVTVKLDSQQKVLTVRSDFLSEVQRKSSAAAPLSEDPLKPFDILGNEGGSQDWIG
GGGSSAGGDGWNSARPSSERSPWPSFPESGTSNGPGSSSTNPFGSDAKNDEDSPWISKLT
PEASTSWGAAKSSVDTANDGQASGWGKSDSKICSDGNASGALGKTVVPSGDSAGFTDSES
GGWKKNQSANFGDDNAPVETSADRWGSKSRSSGSWGDQNASTTVSEIQPAGKGNAGAWNV
GTAKDESGGWGKPKNVGDVGSSAWNKSTAGDGDGQNGSWNKPKPSNHDGNVGKKEWGQGN
EASDNGNKWQSSRSDGGKKWGTNEAEREGGSSWNTSKSSDVGPASWKDKPDSSSLTAPKG
DQWAEGWDKQHSSNDTKASDDNSSWNKKPVESGKDGELKNQGSGWNVGKTSGGDSASGWG
QTSKEADLSDQAGSWGSNWKKNSDTRNEDSSSAKKSSWGSGSGNSNWGEKSNWNSGNEFN
AITGGAEAQTDVSNDTSGYGSWKPESSDRGGYRGRGGFRGRGERGRFGGRGRSDRGGFGR
GGSDRGGFGGRGRGRWNSEGGSNDGENKGWSGGGGGGSDNKGWGSGGGGSDNKGWSSGGD
GSNNKGWSTGGEGSGNKGGGDNKGWGSGSGGSSDDKGWSGGGNGVGGGDNKGWGSGGGGS
NDNKGWSGGDNKGWGSAGGSSDNKGWSSGGSGGDNKGWSSGSGGGGDGCGDKGWSSGGGG
DNKGWGGGGESGDKGWSSGGSREWEKSGSDRGGFGGRGRGRWSSGSGSNDSDSGSGGWSG
GGDRSDRSGGGFRGRGRGRWNQEGSYDGDNGGQRGGYGGRGRGRWNQENGSNEGGDNGGW
SGGRGGFGSRGRGSWNQDDGGSGGWSGGNGGRGGFGGRGRGRRNQDSSNDGNNDDKPASW
STGSGNSGGWNSGGGGGGGGAGSWNQGGDEKNQQQHSWKSSNDGGQGSGWKEPSGSDHNN
WESSGSSGAGNSSGWNNSTTGKETEESGGHNSWNQTTKTDSQGGGWQKSASSWNAGTENQ
TVTKDVSSVSKDGGWGKSAEPSTLDKEIANVGAQGGGAAGWEKPTSSWNTEQSRGENNSG
GGRGGARGK
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaagggcaaaggtattgccaatgattcttcttccggtgaacggaagcttcgc
gatgacaatacttcctccgctgcccgcaagaggcgcgaccggagcgttctccagtttttc
gaggatgtcgctcccgaagtcggtggcgaaagcgacaacagtgatttttttgatgatctc
atggacatggaggataatttggggacattaccgacatttaagaatgatgatgcaaaagct
caagatattccattcttcccaaaagaagaggaaatgaatgaagaagaatttgatagaata
atggaggaagtctacaatagagcacctggattaggtgcatttgcagaagaaaattatgag
aacaaaaattccactggaagaaaccctcccgcacaatctgccagggatactatctctttg
tggaaggttaaatgcatggttgggcgtgagcggcaatccgttttttgtcttatgcagaaa
tttgttgatttgcactcatttggtaacaagctacagataaaatctgcgttttgtgtggag
catgtaaaaggttttatttacgttgaagctccaaggcagtatgatttaattgaggcatgt
aaaggcataactggaatatactctactcgtgtagcttctgttcccgagaatgacatctct
cagttgctttctgttcgaagtagagttagtgaagtcactgtgggtacgatggcccgtgta
aaaaatggaaaatacaagggagaccttgctcagattgttgctgtcaacaatgcacgtaag
agagcaacagtgaagctggttccaaggattgatctccaagctatggccgaaaaatttggt
ggaggagctgctgctaagaaaactgccaatcctgccccacgattgatcaactctagtgaa
cttgccgaatttcgaccacttatgcaatttagacgtgaccgtgaaaccggaaagctattt
gagtttcttgatgggatgatgctcaaggatggatatctatacaaaaaaatatctttagat
tcattaagctgctggggagtgatgccttctgaagatgagctcttaaagttcaagccttct
gagagcaatgagtccaatgatctggagtggctttctcaactttatggtgaaaagaagaag
aagaagaagaaggttgttacaactgaaaaagggggtggaaaaggagagggctcatcaggg
tctagttccacaagcagctttggagatcataatcttgtttgttttggccggaaggatttt
gggatgatattaggaacatcggaaaaagatgatagttacaagattttgaaggacagccct
gatggatctgttgtggtgaatgtgcaacggaaggagttgaaaagtggggctttagatgcc
aaatttactgctgctgatcacaatggaaagatcatctctgtttcagacaatgtcaaggtt
ttagaaggatcattgaaggataagcaaggaattgttaagcatgtatacagacacacactg
tttgtgtatgacgagaatgaggtggacaatgatggttatttctgctgcaaatctaacatg
tgtgagaaaatcaagatttcttatgatgtacctggtggaaaggaggatgacaagggtttc
tctggttttgaggatttctcctcttctcccaagtcacctttatcacctaaaaagccgtgg
gcagagaaggaaactggtcgtgagtacaaccgtgatgacagagcagatggaatgttctcc
attggtcaaaccttgagaatacgtgttggtcctttaaagggatacctatgtcgtgttata
gccgtacgcaaaagagatgttacagtgaagcttgattctcaacagaaggttcttacagtc
agatctgattttctttctgaggtacagagaaagagctctgcagcagcacctcttagtgag
gatcccctaaaaccgtttgatattctgggaaatgaaggcggctcccaagattggattggc
ggaggggggtcatctgcaggtggtgatggctggaattctgccaggccttcttcagaaaga
agtccttggcccagtttccctgagtctggtacctcgaatggcccagggtccagttctaca
aatccttttggttctgatgctaaaaatgatgaagattctccttggattagcaagttgact
ccagaggcaagcacatcctggggtgctgcaaaatcaagtgtagatactgcaaacgacggt
caagcctctggatggggaaagagcgattctaaaatttgttcagatggcaatgcctctggt
gctttgggcaaaacagtagtacctagtggagattctgcaggctttacagattcagaatct
ggaggttggaaaaagaatcaaagtgctaattttggtgatgataacgctccagtcgaaact
tctgccgataggtggggcagcaaaagtagatcaagtggaagctggggcgatcaaaatgct
tcaaccactgtctctgagattcagccagctggcaaaggaaatgcaggtgcctggaatgta
ggcactgccaaggatgagtcaggtgggtggggtaaaccaaagaacgttggggatgttggc
agttctgcttggaacaaatctactgctggtgatggagacggtcaaaacggcagttggaat
aaaccaaaaccttctaatcacgatggaaatgttggaaaaaaagaatggggacagggtaat
gaagccagtgataatggtaacaaatggcagagttcaaggtctgatggtggaaaaaaatgg
ggcactaatgaagcagaacgtgagggtggaagcagttggaatacatccaagtcgtctgat
gttggtcctgctagttggaaagataaacccgactcctcaagtttgacagctcctaaagga
gatcaatgggcagaaggttgggataagcagcacagttcaaatgatacaaaagcctctgat
gacaattcttcttggaataaaaaacctgttgaaagtgggaaagatggcgagcttaagaat
caaggcagtggttggaatgttggaaaaacttctggtggagattctgcatccggatggggt
cagaccagcaaggaagctgatttgagtgatcaagcaggtagctggggttctaattggaaa
aagaattctgataccaggaatgaagattctagttcggccaagaaaagcagctggggttct
ggaagtggaaattctaactggggagagaaaagcaattggaactcaggaaatgaatttaat
gctatcaccggtggtgctgaagctcaaactgacgtttctaatgatacctcaggttatggg
agttggaagccagaaagtagtgatagaggaggatatcgtggaagaggtggttttagagga
aggggtgaaaggggccggtttggtggcagaggcagatctgatagaggtggttttggcaga
ggtggttcagacagaggtggttttggaggcagaggccgtgggaggtggaacagtgaaggt
ggttcaaatgatggtgaaaataaaggatggagtggtggtggcggcggcggcagcgacaac
aaaggatggggcagtggtggtggaggcagcgacaataaaggatggagcagtggtggtgac
ggcagtaacaataaaggatggagtactggtggtgaaggcagtggcaataaaggtggtggt
gacaacaaaggctggggtagtggcagtggcggcagcagcgacgataaaggatggagtggt
ggtggaaatggtgttggtggtggtgacaataaaggatggggcagtggtggtggcggtagt
aacgacaataaaggatggagtggtggtgacaacaaaggatggggcagtgctggcggcagc
agcgacaataaagggtggagtagtggtggcagtggtggcgacaataaaggatggagtagt
ggaagtggtggtggcggtgacggttgcggagataaagggtggagtagcggtggtggtggc
gacaacaaaggatggggtggtggtggtgagtctggtgacaaggggtggagtagtggaggt
agtcgcgaatgggagaaatctggatcagatcgaggtggatttggtggcagaggtcgtgga
agatggagcagtggaagtggttcaaatgacagtgacagtgggagtggggggtggagtggt
ggtggtgatagatcagaccgaagtggaggtggatttagaggtagaggccgtggaagatgg
aaccaagaaggttcctacgatggtgacaatggagggcaaagaggtggatatggaggccga
ggacgtgggagatggaatcaagaaaatggttcaaatgaaggtggtgacaatggtgggtgg
agtggtggtagaggtggatttggaagtcgaggccgtggaagttggaatcaagacgatggt
ggttcaggaggatggagtggaggaaatggtggtagaggcggatttggcggccgaggtcgt
ggaaggaggaatcaagacagttcaaatgatggcaataatgatgataaacctgcaagctgg
agcacaggttcaggtaatagtggagggtggaacagtggcggtggtggtggtggtggtggt
gcaggatcttggaaccaaggaggtgatgaaaagaaccagcagcaacatagttggaagtct
agcaatgatggcggtcagggatctggttggaaggaaccaagtgggagtgatcacaataat
tgggaatcatctggttcttctggtgcaggtaatagttctgggtggaacaattcgactaca
ggcaaggagacggaagagagtggtggtcacaacagctggaaccaaacgacaaagacggat
tctcaaggtggaggctggcagaagtcagcatctagttggaatgccggaactgagaatcaa
acagtgaccaaggatgtgagttcagtttctaaagatggaggttggggaaagtctgctgag
ccatcaaccctggacaaagaaatagccaacgtaggtgcccaaggaggaggagcagcaggt
tgggagaagcctacatctagttggaatacagagcagtctcgaggcgaaaacaacagcgga
ggaggacgaggaggagctcggggtaaataa
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integrated database retrieval system
