Cucumis sativus (cucumber): 101209047
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Entry
101209047 CDS
T02486
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101209047
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
101209047
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
101209047
NCBI-ProteinID:
XP_031744868
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Position
7:complement(2231312..2236702)
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AA seq
412 aa
AA seq
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MVEGTTEIKMMGLRSNIMTLLLHLLLMLASTAKGQSIFDITTYGAKPNTDITQALANAWK
DACASTYSSKLLIPMGVYHLNQSILHGPCKSTIEVRMEGTLQAHPDPIGDGLVLFQYIDQ
LTLSGTGAFDGQGEKGWEKNDCHLKKICTKLPMNVKFSFVTNSMVKDITSLDSKNFHFNL
LGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTGDDCISVGDSNKQITITN
VTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIKTWPDCAVAYTASDLHFE
DIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRGTSATFVAVKFICSTVFS
CEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEAAPVNSPSTD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggtggagggtacgacagaaataaaaatgatgggattgaggtcaaacattatgacatta
ctattacatttgttgttaatgttggcatcaactgcaaaaggtcaatccatttttgatatc
actacatatggtgccaaacctaatactgatattactcaggctttggcaaatgcatggaag
gatgcatgtgcatcgacctattctagtaaattgttgattccaatgggagtttaccatcta
aaccaatccattctccatggtccttgcaaaagtactattgaggttcggatggaaggaaca
ttacaagctcatccagatccaataggagatgggttggttctttttcaatatatcgatcaa
ttgacattgtcaggcacaggtgcttttgatggtcaaggagaaaaaggttgggaaaagaat
gattgtcacctgaagaaaatatgcactaaacttcctatgaatgtgaagttcagtttcgta
accaattcaatggtgaaggacataacttcgttggatagtaagaattttcacttcaatctt
ttgggttgcaagaatgttacttttcaaaatgtgacaattattgcaccagagaatagtccc
aacaccgatggaattcatgtgagcagttcagaagtgattaacattttcaatacacgtatc
tcaaccggagatgattgtatatctgttggagacagcaacaagcaaataactattactaat
gtaacttgcggaccaggtcatggcataagtataggaagtttaggcaagtacaccaaggag
aaagaggtggcaggagttacagtgaaatcatgtaaacttatcaatacttcaaatggtgtt
agaatcaagacatggccagattgtgcagttgcatacacagcctctgacttgcattttgaa
gatattgaaatggttaatgttagcaatcctgtgattattgaccaagaatattgtccatct
aatcaatgcaacaaaaagattccatcaaaaattaagatcaacaacgttagtttcaagaat
atcagaggcacttctgctactttcgttgctgttaaatttatttgtagcacagtcttttcg
tgtgaaggtgtggaagttacagatattgacctcgcttacatcggaactcaaggacggatt
acgtctcagtgtagaaatgtgattcccatcattactggaaagcaaaatcctcgtgcgtgt
gttgaagctgctcctgttaattctccatccacggactga
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