Cucumis sativus (cucumber): 101209342
Help
Entry
101209342 CDS
T02486
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101209342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101209342
03110 Chaperones and folding catalysts [BR:
csv03110
]
101209342
03029 Mitochondrial biogenesis [BR:
csv03029
]
101209342
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csv04147
]
101209342
Enzymes [BR:
csv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101209342
Messenger RNA biogenesis [BR:
csv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101209342
Chaperones and folding catalysts [BR:
csv03110
]
Heat shock proteins
HSP60 / Chaperonin
101209342
Mitochondrial biogenesis [BR:
csv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101209342
Exosome [BR:
csv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101209342
Exosomal proteins of other body fluids (saliva and urine)
101209342
Exosomal proteins of breast cancer cells
101209342
Exosomal proteins of colorectal cancer cells
101209342
Exosomal proteins of bladder cancer cells
101209342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DndB
Motif
Other DBs
NCBI-GeneID:
101209342
NCBI-ProteinID:
XP_004135135
LinkDB
All DBs
Position
5:complement(26880038..26885066)
Genome browser
AA seq
619 aa
AA seq
DB search
MATPIRRHIFLLSSSFTASTRTMASSPTPISPLSFTNPISTSRTKPKSLPFPNKPPSSLP
PALNSTPKPPPKDLYFNHDGSTFKKLQVGVNLVAELVGITLGPKGRNVVLQNKYGPPKIV
NDGETVLKEIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSVVLAQGLIAEGMKVIASG
MNPVQIARGIEKTAKALVSELKLMSREVEDHEIAHVAAVSAGNDYAVGSLVSDAFRQVGW
KGVVQIEKGKSVDNSLQIVEGMQFDRGYLSPYFVTDRRKMVVEFHECKLLLVDKKISDPK
EMFKILDNAVKEKYPIVILAEGIEPEALAPVIRNKLRGVLKAAAIKAPAFGERKSHYLDD
IATLTGATVVREDNGLTLEKTGKEVLGSACKVVISKDSTLIVTDGNTREAVQKRVLQIQK
LMENTEEKFPKKILNERIARLSGRIAIIQVGAQTEVELKDRQLRIEDALNASKAAIEEGV
VVGGGCCLLRLSTKVDAIKNVLENDEQMVGAEIFKRALSYPTKLIARNAGVNGSVVIDKI
LSNNDLDYGYNAATDRYEDLMKAGIMDPSKVVRCCLEHAASVSKTFLTSDAVVVDMKESQ
LIPRRTPMPISGGVGQLGL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggctactcccattcgccggcatatcttcctcttatcttcatccttcactgcgagtacc
agaactatggcgtcttctcccactcccatttctccactatcttttaccaatccaatatca
acatcaagaacgaaaccaaaatcattaccatttccaaacaaaccgccgtcttcattgcct
cctgcgttgaactccacccccaaacctccgcccaaggacctttacttcaaccacgatggc
tctacttttaaaaaacttcaggtcggagttaatttggtagcggagctggtgggtattacc
ttgggaccgaaggggaggaatgtggtgcttcagaataaatatggaccgcccaagatcgtc
aacgatggtgaaaccgtcctgaaagagattgagctggaagaccctttagagaacgttggg
gtgaaattggtgagacaagctggtgctaagacgaatgaccttgctggtgatggttccact
acatctgtcgttcttgcccaaggattgattgctgagggtatgaaggttattgcatctggc
atgaatcctgttcaaattgcacgtgggattgagaagactgcaaaagcactagtttctgag
ctgaaattgatgtcaagagaggttgaagaccacgagatagcacacgtggccgcagttagc
gcagggaatgattatgctgtgggaagtttggtttcagatgcctttcgtcaagttggatgg
aagggagtcgtccaaattgaaaaagggaagagtgtggataatagtttacaaattgttgaa
gggatgcaatttgatcgtggatatttatccccatacttcgtgactgatagaaggaagatg
gtagtagaattccatgagtgcaagttactgttggtcgacaaaaaaatttcagatccaaag
gagatgtttaaaatattggacaatgcagtgaaagagaaatacccaattgtgatattggca
gagggcattgagccggaagctctggctccagtaattaggaataaacttagaggtgtgctg
aaggcagccgctatcaaggctcctgcctttggcgagcgcaagagtcactatttagatgac
atagccactttaactggagctaccgtggtcagagaagataatggattgacgttagaaaag
acaggcaaggaggtattgggctccgcttgtaaggttgttatatcaaaagattccacactg
atagttacagatgggaatactcgggaagctgttcagaaaagggtcttacaaattcaaaag
cttatggagaacactgaggaaaaatttccgaagaagatattgaatgagagaattgcaaga
ttatctgggcgaattgcaataattcaggtaggagcacaaactgaagttgagttgaaggat
agacagttaaggatcgaggatgctttgaatgcatcaaaggctgctattgaagaaggtgtt
gttgttggtggaggttgttgtcttttaaggctgtctacaaaggtggatgctataaaaaat
gtcctggaaaatgacgagcagatggttggagccgaaattttcaaaagggctttgagttat
cctacaaaactaatagcgagaaatgccggtgtcaatggaagtgttgttatagataagatt
ctaagtaacaatgatctggattatggatataatgccgccacagaccgttacgaggatcta
atgaaagctggtatcatggatccatcaaaggttgttagatgttgcctggagcatgcagct
tctgtttccaaaactttcctgacatccgatgctgttgtagttgatatgaaggaatcacag
ctcatcccaagaagaacaccgatgccaatctcaggaggcgtcggacaattgggtctctag
DBGET
integrated database retrieval system
