Cucumis sativus (cucumber): 101209556
Help
Entry
101209556 CDS
T02486
Name
(RefSeq) adoMet-dependent rRNA methyltransferase spb1
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csv03009
]
101209556
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101209556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
101209556
NCBI-ProteinID:
XP_011649233
UniProt:
A0A0A0LIR7
LinkDB
All DBs
Position
2:complement(12370796..12376982)
Genome browser
AA seq
855 aa
AA seq
DB search
MGKVKGKHRLDKYYRLAKEHGYRSRASWKLAQLDSKYNFLRSSHAVLDLCAAPGGWMQVA
VERVPVGSLVVGVDLVPIAPVRGAVAFEQDITKPECKARLKKIMSEKGCAAFDLILHDGS
PNVGGAWAQEAMAQNSLVIDSVRLATQLLAPKGTFVTKVFRSQDYSSVLYCMKQLFEKVE
VDKPAASRSASAEIYVLGIRYKAPAKIDPRLLDVKYLFQGSIEPQQKVVDVLRGTKQKRH
RDGYEDGATTLRKVSSASNFIWSDSPLEVLGTVTCIAFDDPDSLPIKDHDLTTEEVKALC
DDLRVLGKQDFKHLLKWRLHIRKALSPDQKPTSTSVKDAENEVKQDEDDKLLNEMEELAY
AMERKKKRAKKLLAKRKAKDKARKAMGTQLDVMEEGYVDHELFSLSNIKGKNDLRAVDST
EYDDDNVELGEHENDVTKDKNRGSSASDIDSDEERRRYDEHMEELLDQAYESFVSRKEGS
AKRRKRVKNAYSDNAELLEEDENGGDGIQSDYDSDENIVDADKNPLMVSLDDGAEPTQEE
IASKWFSQDIFAEAAEEGDLKRLDSDDDMEVDGPKETLAVSKKAKSNISQNAGEKSKIST
NARESNKVDDGFEVVPAPATDSSDSSSSEESDDEDPDTRAEILACAKKMLRKKQREQILD
DSYNKYMFDDSGLPKWFLDEEQRHRQPIKPITKEEVAAIRAQFKEIDARPAKKVAEAKAR
KKRIAMKKLEKVRKKANVISDQADISDRSKRKMIDQLYKKAVPQKPKKELVVAKKGVQVR
VGKGKVLVDRRMKKDARKHGMNKQGKGSKKGKNSKAPRAKGGPAKDSNTPGGKAGRAGKA
GFTKASGKKGRRGNK
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagtcaagggaaagcatcgtttggacaagtactatcgccttgccaaagagcat
ggctatcgctctcgtgcctcgtggaaactcgcccagctcgattccaaatacaacttcctc
cgttcttcccatgccgtcctcgatctttgcgccgcccctggtggttggatgcaagtcgcc
gtcgagcgggttcctgtcggtagtctcgtcgtcggtgttgatttggttcccattgctccc
gtccgcggtgctgttgctttcgagcaagatatcaccaagccggagtgtaaagccaggctc
aagaagattatgagcgaaaaggggtgcgctgcttttgatttgatcttgcacgatggttcg
cccaatgttggtggtgcttgggcgcaggaggctatggctcagaattcgttggttattgac
tctgtcagattagctactcagttgttggctcccaagggtacatttgttaccaaggttttt
aggtcacaagattacagttctgtcctatattgtatgaagcagttatttgaaaaggttgag
gttgacaaaccagctgcaagtcgatctgcatctgcagaaatatatgttttgggtattagg
tataaggctcctgcaaagattgatcctcgtctccttgatgtgaaatacctctttcaagga
tctatagaaccccaacagaaggttgtggatgtactgagaggaacaaaacaaaagagacat
cgtgatggatatgaagatggtgcaacgactcttcggaaagtgtcttctgcatctaatttc
atctggtcagattctcctctcgaggtcttaggaactgtgacttgtatagcttttgatgat
cctgattctttgccgattaaggatcatgatttaacaactgaagaggttaaggcactttgt
gatgatttgcgtgtcttgggaaagcaagattttaagcatctgctgaaatggcgattgcac
ataagaaaggccttatctcctgatcaaaagcctacatccacttcggttaaagatgctgaa
aatgaggtaaagcaggatgaagatgataaattactaaatgagatggaggagcttgcatat
gctatggagcggaagaagaaaagggcaaaaaagctacttgcaaaaaggaaagctaaggac
aaagctcggaaagcaatggggacacaactagacgtcatggaagagggttatgttgatcat
gagttattctctctttccaacatcaagggtaagaatgatttaagagctgtggattcaact
gaatatgatgatgacaatgttgagttgggagaacatgaaaatgatgtaaccaaagacaaa
aaccgtgggtcttctgctagtgatattgactctgatgaagagcgcagaaggtatgatgaa
catatggaggaattgttggatcaggcttatgaaagctttgtttccagaaaggaaggtagt
gcaaagcggcggaaacgtgtaaaaaacgcttattctgataatgctgagctgcttgaggag
gatgagaatggaggcgatggtattcaatctgattatgattcggacgaaaatattgtagat
gcggataaaaatccactgatggtatctcttgatgatggtgccgagccaactcaagaggaa
atcgcaagcaagtggttcagtcaggatatttttgctgaagcagcagaggagggagatttg
aagaggttggatagcgatgatgacatggaggttgatggaccaaaggagactcttgctgtc
tccaagaaagccaagtcaaatatttcacagaatgcgggagagaagtctaaaatttcaacc
aatgcaagagaatctaataaagtagacgatggatttgaggtggttcctgccccggctaca
gattcaagtgacagttcatcctctgaagaatccgatgatgaagatcctgacacaagggct
gagatattagcatgtgcaaagaagatgctgaggaaaaagcaacgagagcagattcttgat
gattcttacaacaaatacatgtttgatgactcaggcttacccaagtggtttttggatgag
gagcaaagacatcgtcaaccaataaagccgataaccaaagaggaggttgccgcaataaga
gcacagtttaaagaaattgatgctcgccctgctaaaaaggtggctgaagctaaagcacga
aagaaacgaattgcaatgaagaaactcgagaaggttcgcaagaaggcaaatgtcatctca
gaccaggctgatatatcggatcgatccaagaggaagatgatagatcaactttacaaaaaa
gcagtaccccagaagcctaaaaaggagcttgtggttgcgaagaaaggagttcaagtcagg
gttggaaagggtaaggtcttggtcgatcgacgtatgaagaaggatgcgagaaagcatgga
atgaataagcaaggtaaaggttcaaagaagggaaagaactcgaaggctccaagagctaag
gggggacctgcgaaggactcgaacactccaggaggtaaggcaggaagggcaggtaaggcg
ggattcactaaagcttccgggaagaagggaagaaggggaaacaaatga
DBGET
integrated database retrieval system
