Cucumis sativus (cucumber): 101209571
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Entry
101209571 CDS
T02486
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101209571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csv03400
]
101209571
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
101209571
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
101209571
DNA repair and recombination proteins [BR:
csv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
101209571
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
NFACT_N
Ribosomal_S13
DUF465
Motif
Other DBs
NCBI-GeneID:
101209571
NCBI-ProteinID:
XP_004152179
UniProt:
A0A0A0KWY6
LinkDB
All DBs
Position
4:1125195..1129701
Genome browser
AA seq
402 aa
AA seq
DB search
MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFEASLLGKTILSAHRKGK
HLWLCLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVELDDGVDL
SFTDKRRFAKVSLLEDPASVPPISKLGPDALLEPMALDEFIESLKKKKLAIKTLLLDQSY
ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVIEKALEVGADSSRFPNNW
IFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQKLTGAEPKNQNSKRKGNDNKKMND
ESDGELVSKTKKTADIKQKPKPKGRSKKPSKRKSKSEDDDGSDEEAENDDASDDDNGRPE
GKKKVGTKTNIGQRFDAASEPDKSLKQTVRSSQIGRRRKKAK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttaccggaggtggaggcggcgaggagagccatagaagagcattgcgtcggg
aaagtaatcaagaaggcggtaatagccgacgatacgaaggttatcgacggcgtatcacct
tccgattttgaggcttcgctcttaggcaaaaccatcctctccgcccatcgtaagggcaag
cacctgtggctctgtctcgattctcctcctttccctgcatttcacttcgggatggcaggt
gccatatatattaaaggtgtggctgtcacaaactataaaaggtctatggttaatgacgat
gatgagtggccttctaagtactctaagttctttgttgagctcgatgatggtgtagaccta
tccttcactgacaaaaggcgatttgcaaaagtctccctgctcgaagatccggcttcagtg
cccccaatatctaagcttggcccagatgctcttctagagcctatggcattggatgagttt
attgaatccctgaagaagaagaaactagcaattaagactttattgcttgatcagagttac
atttcgggtattggcaattgggttgcagatgaagtgctttatcaagcaagaattcatcca
aatcaaagtgctgcaaccctctccaaagaaagttgtgcagctttgcataagagcatacag
gaggtaattgaaaaagcgcttgaagttggagcagatagtagtcggttccctaataattgg
attttccattcacgtgaaaagaagcctggcaaggcttttgttgatggtaaggaaatccac
tttatcaccacaggtggcaggacatcagcctttgtacctgagttgcaaaagcttactgga
gctgaaccgaaaaatcaaaactcaaagagaaaaggcaacgataacaagaaaatgaatgat
gagagcgatggtgaactagtgagcaagacaaagaaaactgccgatattaagcagaagcca
aagcctaaaggtcgctctaagaaaccttcaaaaagaaaatccaaaagcgaggacgatgat
gggtctgacgaggaagctgaaaatgatgatgctagtgatgatgacaatggtcgccctgaa
ggaaagaagaaagtgggaacgaaaacaaatattggacaaaggtttgatgctgcttctgaa
ccagataagtctttgaagcaaacggttcggagcagtcaaattggtaggcggaggaagaaa
gcaaagtaa
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