Cucumis sativus (cucumber): 101209661 Help Entry 101209661         CDS       T02486                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism csv  Cucumis sativus (cucumber) Pathway csv03040   Spliceosome Brite KEGG Orthology (KO) [BR:csv00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     101209661  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:csv03019]     101209661    03041 Spliceosome [BR:csv03041]     101209661 Messenger RNA biogenesis [BR:csv03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      101209661 Spliceosome [BR:csv03041]  Complex B   Other components    Prp19-related factors     101209661  Complex C     101209661 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_15 TPR_19 ARM_TT21_C ARM_TT21 Motif Other DBs NCBI-GeneID:  101209661 NCBI-ProteinID:  XP_004134724 UniProt:  A0A0A0KLE6 LinkDB All DBs Position 6:complement(29053897..29060710) Genome browser AA seq 913 aa AA seqDB search MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAEAPFKKRFIIYERALKALPGSY KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML AHKMENMDLSDEEDEVQENGLEEEEEEEEDIRLDVDLSVSKFEKKILQGFWLYDDNDIDL RLARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMK AVGKPHTLWVAFAKLYEAHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNF KGALELMRRATAEPSVEVKRKVAADGNEPVQMKVHKSLRLWTFYVDLEESLGTLESTRAV YERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVK RYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAKRAMKVYDQATKAVPNN EKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCLKYAELEKSLGEIDRAR GIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYL MQKDQTMNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDTAKDNGRKVGFVSAGVESQAD GELKVTAHQEDIELPDESDSEEDENVEIAQKEVPSAVFGGLTRKKEDSDEVDGEKDDDSH LGALERIKRQKKA NT seq 2742 nt NT seq  +upstreamnt  +downstreamnt atgtcgatttcccaagatttgtatccatcacaggatgaccttctctacgaagaagagctc cttcgaaatccttttagtttgaaattgtggtggcgctacctcatagcacgagcagaagca ccattcaaaaagcgatttataatctatgagcgagcactcaaggccctcccgggtagctat aagttgtggtatgcatatctgcgcgaacgcctcgatttggtacgaaatcttcccattact cattctcaatacgaaactcttaacaacacgtttgaacgagcgcttgtgactatgcataaa atgccaagaatatggataatgtacctacagactttgacaaaccagaaattagtgacacga acgcgtcggacatttgatcgagccctctgtgcccttccagtgacacaacatgatcgcatt tgggagccatatcttgtttttgttagccaaaagggtattccaattgagacctcgcttaga gtttatcgaaggtatttaaaatatgatcctacacatattgaagacttgatcgaatttttg gttaattcaaatctgtggcaagaagctgcagagaatttggcttctgtgttgaatgacgat caattttattctataaaggggaagaccaagcatcgactgtggttggagttgtgtgacttg cttactaggcatgctactgaagtttcagggttgaatgttgatgccataataaggggcggc attaggaagttcacagatgaagtagggcgcttatggacatcacttgcagaatattacatc agaaggaatttgcacgagaaggcaagagatatattcgaagaagggatgactactgttgtt accgtaagagattttagtgttatatttgattcgtactctcaatttgaggagagtatgcta gctcataaaatggaaaatatggatttgagtgatgaagaagatgaagtacaagagaatggc ctggaggaggaggaggaggaggaggaggacatacgattggatgttgatttatcggtatct aagtttgagaagaagatacttcaaggcttctggctgtacgatgataatgatattgatctg agactagctaggttagaccatctaatggacagaaggccagaattagctaatagtgttctt ctaagacaaaatcctcacaatgtcgaacagtggcatcggaggattaaattatttgagggc aatcccacaagacagatcttgacttatactgaggctgtgagaacagtggaccccatgaaa gcagtgggtaagcctcacaccttgtgggttgcttttgccaagttgtatgaagcacacaaa gatcttccaaatgcaagagttatttttgacaaagctgtacaagttaactacaagactgtg gataacttggctagcatttggtgtgaatgggcggaaatggaattgaggcataaaaatttt aaaggagctttggagctaatgcgtcgagctacagcagagccatctgttgaagtcaaacga aaagtggctgctgatgggaatgaacccgtccagatgaaggtgcacaagtccctaagactt tggaccttttatgttgatttggaagaaagtcttggaaccttggagtctacccgggcagtt tatgagcgaatacttgacttaagaattgctaccccacaaataataatcaactatgctttg cttcttgaggaacataagtactttgaagatgcattcaaggtatatgaaaggggcgtcaag atttttaaatatcctcatgttaaagatatatgggtcacatatctatccaaatttgtgaaa agatatgggaagacaaaattggagcgggcaagagaactatttgagcatgcagttgaaaca gcacccgctgattcagttaggcctttgtatcttcaatatgcaaagctcgaggaagaccat ggtttggcaaagcgagctatgaaggtctatgatcaggcaactaaagctgttccgaataat gagaaattgagcatgtatgaaatatacattgcccgtgcagctgagatatttggtgttcct aaaactagagaaatctatgaacaagcaatagaatctggtcttcccgatcaagatgtgaag actatgtgcttgaagtatgcggagctggagaagagtttgggagaaattgatcgtgctcgt ggaatatatgtatttgcttcacagtttgcagaccctagatcagatttgaacttttggaat aagtggcatgagtttgaggtgcaacatggaaatgaagatacttttagagagatgcttcgt atcaaaaggagtgtttctgctagctatagccagacacattttattctgcccgagtatcta atgcaaaaggatcagacgatgaaccttgacgaggcaaaagataaattgaagcaggctggg gttacagaagacgagatggctgctctagagaggcagttggcccctgcaattgaagacaca gccaaagataacggccgcaaagttggttttgtgagtgctggagttgaatcacaggctgat ggagaactgaaggttactgctcatcaagaagacattgagttacctgatgaaagtgactca gaagaagatgagaacgttgaaattgctcaaaaagaagttccctctgcagttttcggaggc cttactcgaaagaaggaagattccgacgaggtggacggagaaaaggatgatgacagccac cttggtgcgcttgagagaataaaacggcaaaaaaaagcataa

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