Cucumis sativus (cucumber): 101209872
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Entry
101209872 CDS
T02486
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csv03041
]
101209872
Spliceosome [BR:
csv03041
]
Common components
Common spliceosomal components
General mRNP proteins
101209872
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
101209872
NCBI-ProteinID:
XP_011658601
UniProt:
A0A0A0K4Q5
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Position
7:complement(1012514..1023825)
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AA seq
593 aa
AA seq
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MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGEHRSKHL
KSDDESRDRDRHRDRTSSRHRSRSRERDRDRHRSSKENRGKEDREGNREERSSKDRDVDR
DKERSHDRDRRGRDGERNREREQSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES
RERGRDGRRYKDKKDETAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL
IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP
GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFIQFT
RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS
LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLSVGTSLAAFPAFPGLGA
GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV
DRNSAGFVYLRFEKSESAMEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggattttgacgagtatgattatttggagaaaacagttgaaaatcccgagggacaaaaa
gtgaaggaaactgccaatggcggtgatggagaaatgaaatctggagataagcatcatagt
cgaagttcaaaatataagagtgatggtaaagatgatggggaacataggtcaaagcatttg
aaatcggatgatgagtcacgtgatcgagatcggcatagagataggacttcttcccggcat
cggtctaggtccagagagagagaccgtgataggcatcgaagcagtaaggaaaatagggga
aaagaggacagagaagggaatcgggaagagagaagcagtaaggacagggatgtggacaga
gataaagaacgttctcacgatcgtgatagacggggtagagatggtgaaaggaatagggaa
agagaacagtcacgtcgaagtagaagtcgttcagaaagacatcgcagtgatcgggatgat
ggcataagagagaggagtcgagacaatgaactcagggaaagagaaaaggagagagagtct
agagagcgaggcagagatggcagaagatataaagataaaaaggacgaaacagctgaacca
gaagctgatcctgaaagggatcagaggactgtatttgcctatcagataagtttaaaggca
actgaaagagatgtgtacgagttcttctccagggctggtaaggtgcgagatgtacgcctc
ataatggatcgtaattcacgacgttctaaaggcgttgggtatgttgaatttgtggatgca
atgtctgtgcccatggctatagcactttccggccagctcttgcttagtcagcctgtgatg
gtaaagccatctgaagctgagaaaaaccaggttcaatcaacttccgcagctggtggaccg
ggtggagcaatgggcccctactctggtggtgccagaaggttatatgttggcaatctgcac
cccaacataactgaagataaccttcgtcaggtttttggagcttttggcactgtggaactg
gtccagatgcccgttgatgaatctggccattgcaagggttttggttttattcagttcaca
cgtcttgaagatgctagaaatgcactgagtttgaatggacaacttgagattgctggtcga
acgataaaggtgtctacagtcacagatcagcctggtttgcaagatgttggagcaagtaca
ggagaccttgatgaggaagacggcggtggcttgtctttaaacgctagttctagagcatcc
ctgatgcagaagctggaccgtactggtgccgcatctagcattgctggttctctaggtaca
catgttgtaaataacacaggtgctactatgccggcaccgatccttggtggtgcaactatc
ccatcccttagtgttggtacttctttggccgcctttcctgcttttcctggacttggtgca
ggcgttcaggttccccccgtcactgccaatttacttggtgttggtactccaagtgaatgt
ctactgttgaagaatatgtttgatcctacagctgagtcggaaccaactttcgatctggat
atccgagatgacgttgaagaggaatgctctaggttcggaaaattgaaacatatatatgtt
gacaggaatagtgccggttttgtatatttgaggtttgaaaaatcggagtctgcaatggaa
gcccaacgtgcccttaatggaagatggtttgcggggaaaatgattggtgcaactttcatg
gacattccaagctatgaagcgaaatttccagacagtagataa
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