Cucumis sativus (cucumber): 101209960
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Entry
101209960 CDS
T02486
Name
(RefSeq) mRNA-capping enzyme isoform X1
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101209960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101209960
Enzymes [BR:
csv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
101209960
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
101209960
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
101209960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Tc-R-P
DNA_ligase_A_M
PTP-SAK
PTP-NADK
Y_phosphatase
Y_phosphatase2
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
101209960
NCBI-ProteinID:
XP_004147891
UniProt:
A0A0A0L2J5
LinkDB
All DBs
Position
4:15296857..15308266
Genome browser
AA seq
682 aa
AA seq
DB search
MIVSMDLNASPVPEDDEETFERHEEVYIAPEEHIVTGVSIARREREERKRRLKRDRSLER
PVHEYQQPARDQFYPSKNQKSDRNRLPPGWLDCPAFGQEICWMIPSKVPLGESFNDCIAP
GKRYSFKQVIHQQRVWGRKLGLVIDLTNSYRYYTTSDLNKEGIKYVKIPCKGRDSVPDNK
SVNTFVYEVIQFISRQKQQSKKYILVHCTHGHNRTGYMIINYLVRALSISVTQALKMFSD
ARPPGIYKPDYVDALYTFYHERKPDAVVCPSTPEWKRSSDLDLNGEAVPDDDDDGGPAAL
LNENHDDGAQVMTNDDVLGDEIPEDQERGLKQFCYQMLKLNPGARANLQFPGSHPVSLNR
DNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRGFKFRRVQMRFPYRNANDGQVEKI
HHYTLLDGEMIIDTMPDSQKQERRYLIYDMMATNYVSVIERPFYERWKMLEKEVIEPRNF
ERQNIYQSRNPHYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDAY
VPRTHEGLLKWKYPEMNSVDFLFELGEDDSQVLILFERGKRKTMEGNRVKFKDGDPSFYS
GKIVECSWDSDEQVWVCMRIRTDKTTPNDFNTYKKVMRSIRDNITEEDLLKEIHEIIRLP
MYADRIRNDSKAAQHTNSTRRR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgattgtttccatggacttaaatgcatcgccggtgcctgaagacgacgaagagacgttt
gagaggcatgaagaggtgtatatagctccagaggaacatatagtgactggtgtcagtata
gcacggcgggagcgagaagaaagaaaaaggcggttgaagagagatcgctctctcgagaga
ccggtacatgaataccaacaacctgcacgggatcagttttacccttctaaaaaccaaaaa
tctgatagaaacaggcttcctccaggttggctggattgccctgcatttggtcaagaaata
tgttggatgattccttccaaggttcctttgggggaatccttcaatgattgtatagcacct
ggtaaaagatactcatttaagcaagtgatccatcagcagagagtttggggaagaaaactc
ggtttggtgattgatttgacaaattcttatcgttattatacaacatcagatttgaataaa
gagggtatcaagtatgttaagattccttgcaaggggagggattctgtacctgacaacaag
tcagtcaatacattcgtttacgaggtcattcagttcatttctcgtcagaaacaacaatcg
aagaagtatattcttgtccactgtacacatggccataatcgcactggatatatgatcata
aattatcttgtgcgtgcgctgtccatttctgttacccaggctcttaaaatgttttctgat
gcacgccctcctggaatttacaagccagactatgttgatgcattatataccttttaccat
gaaagaaaacctgatgcagttgtttgcccatccacacctgagtggaagagatcttcagat
cttgatcttaacggtgaagcagttccagatgacgatgatgatggaggtcctgctgctctt
ttgaatgaaaatcatgatgatggtgctcaagtgatgacaaatgatgatgttttgggtgat
gagatacctgaagaccaagaacgtggtttgaaacaattttgctatcaaatgcttaaattg
aatcctggagcaagagcaaatttgcaatttccagggtcgcatccagtgtctctgaacaga
gacaatcttcaactgctaaggcaacgctattattatgccacatggaaagctgatggaaca
agatatatgatgctaatcaccatggatggatgctacttgattgacaggggttttaaattt
agaagagtccaaatgagatttccgtacagaaatgcaaatgatggccaagttgagaagatt
caccactatacactacttgatggagaaatgataattgatactatgccagactcacagaag
caagagagaagatatctgatatatgatatgatggcgactaattatgtttcggtcattgag
cgccctttctatgaacggtggaagatgcttgaaaaagaagtgattgaacctcgcaatttt
gagcgccagaatatttatcaaagcagaaacccgcattatagatatgacctagagccattc
agggtgaggagaaaagatttttggttgctctctacagttaccaaacttttgaaggagttc
ataccgaggctttctcatgatgccgatggtctaatatttcaggggtgggatgatgcttat
gttcctcgaacacatgagggtcttttgaagtggaaatatccagaaatgaactcagtcgac
ttcttgtttgagttgggtgaagatgattctcaggttcttattttgtttgaacgaggaaag
aggaaaaccatggaaggaaatagggttaagttcaaagatggcgatccctccttttattca
ggaaagatcgttgagtgctcttgggattctgatgagcaagtatgggtctgcatgcgtatt
cggacagacaaaacaactccaaatgatttcaatacttataagaaggtaatgcggagcatt
agagacaatatcacggaggaggatttgttgaaagagattcatgagatcatacgcttaccc
atgtatgcagataggataaggaatgatagtaaagcggctcaacatacgaattcaacacga
cggaggtga
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