Cucumis sativus (cucumber): 101210288
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Entry
101210288 CDS
T02486
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101210288
Membrane trafficking [BR:
csv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
101210288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
FimL_2nd
Motif
Other DBs
NCBI-GeneID:
101210288
NCBI-ProteinID:
XP_011650398
LinkDB
All DBs
Position
3:2176052..2186149
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AA seq
1422 aa
AA seq
DB search
MAANPPPFQVEDQTDEDFFDKLVEDDFVGPDDSGSKFLDGSDSDDAKAFSNLGINDADNT
FKDSGGGCGGGDHGHDEAVGEKGSVEVDPGALAGHAEEKGTLVSSNSVGRFDVLESGNDG
IGSESTSDLLVSKSDESGGAAIKEVGWSSFHADSSQNWGQGFGSYSDFFNDLGSNDVGSL
GGSLENNLNGGATIKSSSVENYANNSTNYVQYQNDHQVYEGSSDQVSAGQDLSSSQQWEN
LYPGWRYDSASGQWYQVEDSAAVANAQGAVDANLNGEWTNVSGTNTEVAYLQTSQSVVGT
VTETSTTDGVSNFNQVSQGNTGYPEHMYFDPQYPGWYYDTISQVWCSLESYNSSIKSTNE
AQHNQNGYVSANSYNYGNSSMYGDYVQPNEYGSSDVHNQGLDDKLTGSHHNDNQQNVTSW
QTESVSSQAVPTFGGNQLLDRSSSPDFSLRKEQQKSASSYGTVPSYFQPSQVRNEVNGPT
SLNSFPSTMDYGHQFHQDNPKEHEHMPRSSDYYSNQNVTNIQQSFHGGHQSSYASNVGRS
SAGRPPHALVTFGFGGKLVVVKDSSSFGNSSYGSQAPVGGTISILNLMEVVMGNTNPNAI
GNDVRACDYFSALCQHSFPGPLVGGNVGNKELQKWIDERIANCESSGMDYRKAEALRLLL
NLLKIGHQHYGKLRSPFGTDTVLRESDNPESAVAGLFASAKKNSVQFNNYHALSHCLQIL
PSEGQMRATASEVQSHLVSGRKKEALQCAQEGQLWGPALVLASQLGDQFYIDTVKQMALK
QLVPGSPLRTLCLLIAGQPAEVFSTDTTSNINPLGGSMAQNSSQFSANSMLDDWEENLAV
ITANRTKDDELVIIHLGDSLWKERSEITAAHICYLVAEANFESYSDSARLCLIGADHWKF
PRTYASPEAIQRTELYEYSKVLGNSQFILLPFQPYKLIYAYMLAEVGKVSDSLKYCQAVL
KSLRTGRAPEVETWKQLLLSLEERIRAYQQGGYTANLAPKLVGKLLNFFDSTAHRVVGGL
PPPAPSTSHGNIHGNEHYHEPVVPRVSTSQSTMAMSSLIPSASMEPISEWTADSTKMTAS
NRSVSEPDFGRTPRQNQIGSSKESMSADGQGKTSDSRTSRFTRFGFGSQLLQKTVGLVLR
PRPGRQAKLGEKNKFYYDEKLKRWVEEGAEAPAEEAALPPPPTTAPFQNGGTDYNLRSAL
KKEAPSHDGIAEFPSPNPTPAENISGIPPIPPSSNQFSARGRMGVRSRYVDTFNQGNGTS
ANLFQSPSVPSIKPKVATNAKFFVPGPAFSAEPIEETLPEPSQEATTTSEHPSTSTPNDS
FSTPSTTPMQRFPSMGNISVKGANISGHGPFTAANARRTASWSGANFSDALSPPPKPSGL
KPLGEALGMPPSSFMPSESSPSVHTPINGGGGMGDDLHEVEL
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaatcctcctccatttcaggtggaggatcagacagatgaggatttctttgat
aaattggtggaagatgactttgtggggcccgatgattcaggatccaagtttcttgatgga
agtgattctgatgatgccaaggcgttttctaatctgggtattaatgatgcggacaataca
ttcaaggattctggtggtggttgtggtggtggtgaccatgggcatgatgaagccgtaggg
gagaagggttccgtggaggttgatccaggggcattggcaggacatgcagaagagaagggt
actttggtttcttcaaattctgtcgggcgctttgacgtgttggaatctggtaatgatggt
attggatcagaatcgacctcagatttgttggtgagcaagagcgatgaatctggtggtgcg
gccataaaggaggtaggatggagttcgtttcatgctgattcatcgcaaaattgggggcag
gggtttggatcatattcggattttttcaatgatttgggtagtaatgacgtaggaagtctc
ggtgggtccttggagaataatttgaatggtggagcaacgattaaatctagttccgttgag
aactatgcaaataactctactaattatgtgcagtatcaaaacgatcatcaagtttatgaa
ggatccagtgatcaagtttcggctgggcaggatttaagtagcagtcagcagtgggaaaat
ctctatccagggtggagatacgattcagcttctggacaatggtaccaggtagaggactct
gctgcagtggcaaatgcccaaggtgccgttgatgctaatttgaatggtgaatggactaat
gtttctggtacaaacacagaggttgcatatttacaaacttctcagtctgttgtaggcact
gtaactgagaccagcacgacagatggtgtttctaactttaatcaggtatcacagggaaat
actgggtaccctgaacatatgtactttgatcctcaataccctggttggtattacgataca
atttctcaagtatggtgctccttggaatcctataattcatcaattaaatcaactaatgaa
gctcagcataatcaaaacgggtatgtatcagctaatagctataattatggcaacagtagt
atgtatggcgattatgtgcagcctaacgaatatggatcaagtgatgtgcataatcaaggc
ctagatgacaaattgacagggtctcaccataatgacaatcaacagaatgtgactagttgg
caaacggaaagtgtttcatctcaggctgtgccaacttttggaggaaatcagctactggat
aggtcttcaagtcctgatttttctttaagaaaagagcagcagaagtctgctagttcttat
ggaacagttccatcatatttccaaccaagtcaggttcgtaatgaggtcaatggacctacc
agcttaaatagctttccctcaactatggattatggtcatcagtttcatcaggataatcca
aaggaacatgaacatatgcctcgatcaagtgactattatagcaatcagaatgtgaccaat
atccaacaatcgtttcacggaggtcatcagtcttcttatgcttcaaatgttggaagatct
tctgctggacgtcctccacatgcattggtaacatttgggtttggaggtaaacttgtagtg
gtgaaagatagcagctcttttggcaactccagttatggaagtcaggctcctgttggaggc
acaatttctatcctgaacttgatggaagttgtcatgggtaacaccaatccgaatgctatt
ggcaatgatgttcgtgcatgtgattacttcagtgctctctgccaacattcctttcctggt
ccattggttggtggaaatgtggggaataaagagttacagaagtggatagatgaaaggatt
gcaaattgtgaatcatcaggaatggattacagaaaagctgaagcattgaggctgcttctt
aatttgctcaagataggacatcagcattatgggaaacttcgttcaccatttggcacagac
actgtgttgagggaaagtgataatccagaatcagcagttgcaggtctttttgcttctgca
aagaagaatagcgtacaattcaataattatcatgctcttagccactgtttacaaatattg
ccttcggagggacaaatgcgggcaactgcttctgaggttcagagtcatctggtatctggt
agaaagaaagaggctttacaatgtgcccaagaaggtcagttatggggacctgcccttgtt
cttgcttcacagctcggtgatcagttttacattgatactgtgaaacaaatggctcttaag
cagttggtacctggatcacctttgcggaccctatgcctacttatagctgggcagcctgca
gaagtcttttctacagatacaacgtctaacatcaatcctctgggtggtagcatggcccaa
aattcttcacagttttctgcaaatagtatgctggacgattgggaagaaaatttagcagtg
atcactgccaacaggacaaaagatgatgaacttgtaattattcatctcggagactcctta
tggaaggaaaggagtgagataactgcggctcatatttgctatttagttgctgaggccaac
tttgagtcatattcagacagtgctagactatgtcttattggagctgatcactggaaattc
cctcgaacctatgctagcccagaggctatccagagaacagaattatatgaatactccaaa
gttcttggaaactctcagtttatcctactacccttccagccatataagctcatctatgca
tacatgttagcagaagtggggaaagtttcagactcattgaagtattgccaagcagttttg
aagtcactcagaactggtcgtgcacctgaagttgaaacgtggaagcagttgctattgtct
ctcgaggagaggattagagcctaccaacagggtggatatacagcaaatttggctccaaaa
ttagtcggaaaactactaaacttttttgacagtactgcacatcgtgtagttgggggttta
ccacctcctgcaccatcaacctcgcatggcaatattcatggcaatgaacattatcacgag
ccagtagttccacgagtatcaactagtcagtcaacaatggcaatgtcatcgttaattcca
tctgcttcaatggagcccataagtgagtggactgctgatagcactaagatgacagcttca
aacaggagtgtttcagagccagattttggaagaactccaagacagaatcagattggttct
tcaaaggaatcaatgtcagctgatggtcaaggaaaaacgtcagattcaagaacatctcgt
tttacacgttttggttttggttcacaattgttgcagaagactgttggactagtcttgagg
cctcgcccgggtcggcaggcgaagttgggtgagaagaacaaattttattatgatgaaaag
ctgaagagatgggtcgaggaaggtgctgaagctcctgcagaagaggcagccttaccacca
cctcctacaactgcaccgttccagaatggtggaactgattacaacttgagatctgcacta
aagaaagaagcaccatctcatgatgggattgctgagtttccgagtcccaatcctactcct
gcagaaaatatttctggaatcccccctatcccaccaagctcaaaccaattctcggctcgt
gggcggatgggtgttcgttcaaggtatgttgacaccttcaaccaaggcaacgggacctca
gcaaacttgtttcagtcaccttctgttccatcaattaagccgaaggttgctaccaatgcg
aaattcttcgtaccaggtcccgcattttcagctgaaccaatagaggaaactttaccagaa
ccctctcaggaagctaccacaaccagtgaacatccttcaacatccaccccaaatgattca
ttttctactccatcaactacccccatgcaaaggtttcctagcatgggaaacatctcagta
aaaggtgcaaatataagtggccacggtcccttcacagcagccaacgcccgacgaactgca
tcatggagtggtgcaaacttcagtgatgcccttagtccccctcctaaaccatcgggactt
aaacctttaggtgaagctttgggtatgcccccgtcatcttttatgcctagcgaatcatcg
ccttcagtccacacaccgattaatggcggcggtggcatgggagacgacctccatgaggtg
gaactttaa
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