Cucumis sativus (cucumber): 101210638
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Entry
101210638 CDS
T02486
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csv03036
]
101210638
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Meiosis-specific proteins
Others
101210638
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_22
TK
AAA_27
Motif
Other DBs
NCBI-GeneID:
101210638
NCBI-ProteinID:
XP_031741354
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Position
5:2896379..2905826
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AA seq
789 aa
AA seq
DB search
MDDERSSFVVALIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYEPMVIL
VSPNKLAPDGMVGVSVLADRFFATVKKVVMARSCFDDTKGAVLIKNLAAKEPSALGLETY
YKQYYLCLAAAAASIKWIEAEKGVIVTNHSLLVTFNGSSDHVSIDATSVQNLEIIEPLHS
NLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQLFF
GLSQALRKFPKETDRVLCHFCFKQKKVTNEVLHPSDAKKSQNLISSIILLKTALEALPLL
SKVLKEAKSFLLANIYKSICENEKYTNIRKRIGEVIDEDVLHARVPFIARTQQCFAVKAG
IDGLLDIARRTFCDTSEAIHNLANKYREEYKLSNLKLPFNNRQGFYLSIPHKDVQGKLPN
KFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTLLAE
VLCLLDMIVNSFAHTISTKPVDRYTRPNFTENGPMAIEAARHPILESIHNDFVANSIFLS
EASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDDSLE
SNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEYLLTLKAYTIF
ATHMEGLSELATIYPNVKILHFHVDIRNHRLDFKFQLKDGIRHVPHYGLLLAEVAGLPSS
VIETARDITSRIKEKEERRMEINHLQYHPIRMTYNVAQRLICLKYSSHDEDSVREALRNL
KEGYISGRL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagagatcgagcttcgtggtcgctctgatcgagaacagagccaaggaggtt
ggagttgctgcgtttgacttgagatcagcttcacttcatctttctcaatatatcgagacc
agcagctcctaccagaatacaaaaacattgctgcatttttatgagccaatggtcatactt
gtttcccctaacaagctcgcacctgatggcatggttggagtttctgttttggctgataga
ttttttgctaccgtgaagaaggttgtaatggcacgctcttgctttgatgacacaaagggt
gccgttcttattaagaatctggcagccaaggaaccttctgctcttggtttagaaacttat
tacaaacagtactatctctgcctggctgctgctgctgctagcattaagtggattgaagca
gagaagggggtaattgtgaccaatcattctttattggtcaccttcaatggctcatctgat
catgtaagcattgatgcaacgagcgttcagaatttagaaattatcgagccacttcactcc
aatctttggggaacaagtaacaagaagagaagtctgtataacatgctcaaaacaacaaaa
actataggagggtctagacttcttcgtgccaatcttttgcagccattaaaagatatcgaa
accattaatgcccgtctggattgcttggatgaattgatgagcaatgaacaattattcttt
gggctttctcaagctctccgtaaatttcctaaagagactgacagagtactttgtcacttc
tgcttcaagcaaaagaaagttacaaatgaagttttgcatcctagtgatgctaaaaagagc
caaaatttgatatctagcattattctgctaaaaactgcccttgaggcattgcctttactc
tcgaaggtacttaaggaagcaaagagttttctgcttgcaaacatttacaaatctatttgc
gaaaacgaaaaatatacaaacattagaaagaggattggagaagtgatcgacgaagacgtt
cttcatgcaagggttccttttattgctcgcactcaacaatgttttgcagttaaggctgga
atcgatggcctgttggatattgcaagaaggacgttctgtgatactagtgaagctatacat
aatcttgctaacaaatatcgagaagagtacaagttgtccaacttaaaactgccatttaat
aataggcaagggttttacttgagcattcctcataaagatgtacaaggaaagcttcctaac
aagtttattcaggtcttgaagcacgggaacaacatacgatgttctaccctggaacttgct
tctctgaatgttagaaacaagtctgctgcaggagaatgctatatacgaacagaaatttgc
ctggaaggactggtggatgccataagagaggacgtctctatgctaacactgctcgcagaa
gtcttgtgtcttttagatatgattgtcaattcatttgcacatacaatatcaacaaagcct
gttgatcgatatactaggccaaactttacagagaatggcccgatggcaattgaagctgct
agacacccaatcctagaaagtatacacaatgatttcgttgctaatagcatatttctatcg
gaagcatccaacatgataatcgtcatgggtccaaatatgagtggaaagagtacctatctt
caacaaatgtgccttctagttattcttgctcaaattggatgttatgttccagcacatttc
tcaaccttgagagttgttgatcgcatattcacacgaatgggcacagatgatagtctagag
tccaactccagcacattcatgacagagatgaaggaaacggcttttgttatgcagaatgtc
tcccaaaggagtctcgttgtcgtggatgaacttgggagggcaacttcttcctctgatgga
tttgcaattgcatggagctgctgtgaatatcttttgacactgaaagcctataccatattt
gccactcatatggagggcctatcagagctggcaaccatctatccaaacgtaaaaattctt
cacttccatgtggatataaggaatcaccgtttggatttcaagtttcaactaaaggacgga
ataagacatgtaccacactatggccttttattagcagaagtggcaggattgccaagctcg
gttattgaaactgcaagagacattacttccaggatcaaggagaaggaagaaagacgaatg
gagataaaccacttgcagtatcatccgatcagaatgacttataatgtggctcaacgtcta
atatgcttgaaatactccagccacgatgaagattcagtacgagaagcattacgaaatctt
aaagagggctacattagtggcaggctctaa
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