Cucumis sativus (cucumber): 101210662
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Entry
101210662 CDS
T02486
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101210662
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csv01002
]
101210662
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101210662
03036 Chromosome and associated proteins [BR:
csv03036
]
101210662
Peptidases and inhibitors [BR:
csv01002
]
Metallo peptidases
Family M1
101210662
Transcription machinery [BR:
csv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101210662
Coactivators
SAGA/TFTC/STAGA complex
101210662
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
101210662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
101210662
NCBI-ProteinID:
XP_004137463
UniProt:
A0A0A0LQC8
LinkDB
All DBs
Position
1:4118238..4134723
Genome browser
AA seq
1362 aa
AA seq
DB search
MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDNRRVYGFTELEIAVPDIGIVGLHAE
NLGIVSVSVDGDPTEFEYYPRPQHVENERSFKAVSSPSSAADAAGSIYLSSIEKELVPNL
LINCCKAFKSGSEQQDQPFLENGVQTADEDKQNVRLVRIDYWVEKSEVGIHFYNRMAHTD
NQIRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGILLYQVLSKDNPPRKTFVYRVD
IPVNARWISLAVGPFEILADHQNVLISHMCSPVNSLKLKHTVDFFHSAFSCYKDYLSVDF
PFGSYKQIFIEPEIAVSSACLGVSMCIFSSHLLFDEKIIDQTIDTRIKLAYALARQWFGI
YITPEAPNDEWLLDGLAGFLTDLFIKKNLGNNEARYQRYKANCSVCRADDCGLTTLSSSS
ACKDLHGTQCIGIYGKIRSWKSVAILQMLEKQMGPESFRKILQNIVSHAKDTGSTSQLLS
TKEFRQLANKIGNLERPFLKEFFPRWVESCGCPLLRMGFSYNKRKNMVEMAVSRECTATP
ATNVENRDSDAGWPGMMSIRIYELDGVFDHPVLPMTGESWQLLEIQCHSKLAARRLQKTK
KGSKPDGSDDNADIPALDIRSSVESPLLWLRADPEMEYLAEIHFHQPVQMWINQLEKDKD
VIAQAQAIATLEMLPQPSFSIVNALNNFLKDPKAFWRVRIEAALAMAKTASEDTDWAGLL
NLIKFFKSQRFDADTGLPKPNEFRDFPEYFVLEAIPHAVAMVRGTDQKSPREAVEFVLQL
LKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILFLASLLKRIDRLLQFDRLMPSYNGI
LTISCIRTLTQIALKLSGLLSLDRIIELIRPFRDFNSMWQVRIEATRSLLDLEYHCNGID
ATLLLFIKYLEEENSLRGQVKLAVHVMRLCQIMRRSGSNDVVNNDTLVALLLLLEGNMAF
NNVYLRHYLFSILQVLSGRSPTLYGVPREYKTLHMGDTGTFSEQKRMLTSIIPEFNPPEP
SSVSAVAPMPCIPATLSSEPLHVPTPRPDNLAVPELSKEEGAIAEDPKQAMAIVEAPREA
ASVSSSHERKLPVVKIKVRSSAATSRADADNLTTERSHAAPRETDVGPSSSVSVDAPPRN
TAEATSISNRILEEVNSCHDHGSHMTASIGSAKLASYGDELGKEFQCTADSSSRAFGHFQ
PEDPSSSSIIQDNNIDADAQKYASLQTLSLPQHDHGLASSHSRHGKKEKKKDKEKKRKRE
SHKEHRNDPEYIERKRLKKEKKQKEKEMAKLLNEEVKPQPTAMPRIKEPPTKSTPVQLET
NEPSGSRLIIGSVHSKPEASEGTTSAAPKLRIKFKNRTLNNS
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcctcgcaagcccaagaacaccgacgacgccaagccacctgacaactccgga
gctgtagttcgtcaccagaagctctgtctttccatcgacattgacaatcgtcgcgtttat
gggttcaccgagttggaaattgcggttcctgatattggtatagttgggttgcacgcggag
aatcttgggattgtgagtgtttcagtggatggtgacccaactgaatttgagtattatccg
cggcctcaacatgtggaaaatgagaggagttttaaagcagtttcgtcgccgagctctgct
gcagatgctgcagggtcaatctatttgtcttcaatagagaaggaattggttcctaatttg
ttgataaactgctgcaaggctttcaagagtggaagcgagcagcaagaccagccatttctg
gagaatggagtgcaaactgcggatgaggacaagcagaatgtaaggctggttcgtattgat
tactgggtagagaaatcagaggtaggtattcacttctataatcgtatggctcacactgac
aaccaaataaggcgtgcaaggtgctggttcccttgtatggatgatggtctacaacgatgc
aagtatgacctcgagtttactgtctctcaaaatcttgtggctgtcagtaatggaattttg
ttgtaccaggtcttgagcaaagacaatcctccccgcaaaacttttgtgtatagggtagac
atccctgtcaatgcacgttggatatcacttgctgttggaccgtttgaaatccttgctgat
caccaaaatgtacttatatcacacatgtgctcgcctgttaattctttaaagctcaagcat
acggtggatttttttcatagtgcattcagctgctataaggattacctctccgtggacttc
ccatttgggtcatataaacaaatcttcatagagccggagattgcagtatcatcagcatgt
ttgggagtttccatgtgtatatttagttctcatcttttgtttgatgagaaaatcatcgat
cagaccattgatacgaggattaaacttgcttatgcgctggcaagacagtggtttggcatt
tatattacacctgaagctccaaatgatgagtggttgttggatggtcttgctggttttttg
actgatttatttattaagaagaacttgggaaataatgaggcacgctaccagagatacaag
gcaaattgttctgtttgtagagcagatgattgtggtttgaccaccttgagttcctcttct
gcttgtaaagatttgcatgggacccaatgtattggtatatatggaaaaataagatcatgg
aagtctgtggcaatccttcaaatgttggaaaagcagatggggcctgaatctttccgcaag
attctacaaaatattgtttctcatgctaaagatactggttctacgtcacaattactcagc
acgaaagagtttcgtcaattggccaataagattggaaacctagagcgaccatttcttaaa
gagttctttcctcgatgggttgaatcatgtggttgtccactgctgagaatgggattttcc
tacaacaagcgaaaaaatatggttgaaatggcagtttcacgggaatgcacagctacacca
gccacaaatgtagaaaatcgggacagtgatgctggatggcctggcatgatgagtatcagg
atttatgaacttgatggtgtctttgatcatccagttcttccaatgactggagagtcttgg
cagctactagaaatacaatgccactccaaacttgctgctaggcgcctccagaaaactaaa
aaggggtcaaaacctgatggttctgatgacaatgctgatatacctgcactcgacattcgc
tctagtgtggaatctcctttgttatggttgagagcagaccctgagatggaataccttgct
gaaattcattttcatcaacctgttcagatgtggatcaatcaattagagaaggacaaggat
gtcattgcccaagcacaagcaattgcgaccttagagatgctgcctcaaccatctttttct
attgttaatgctcttaacaatttcctcaaagaccccaaggccttctggagagtaagaatt
gaagcagcactggcaatggccaaaacagcctcagaggatactgattgggctggtttgctt
aatttgattaaattttttaaaagtcagaggtttgatgctgatactggactccccaagcca
aacgaatttcgtgattttcctgaatattttgttcttgaggccattcctcatgctgttgct
atggtcaggggcaccgaccaaaaaagccctagagaagccgttgagtttgttttgcaactt
ttgaagtacaatgacaacaatgggaatccttactctgatgttttttggttggctgcacta
gtccaatcagttggtgagcttgaatttgggcaacagagcattctctttttagcatcgctt
ctcaaaaggattgatagacttctgcagtttgacaggctgatgcctagctataatgggata
ttgaccattagctgcatcagaaccttgacccagattgcactgaaactatctggacttctc
tctcttgatcgtatcattgaactgataagaccttttcgagattttaattccatgtggcaa
gttcgaattgaggcaacccgatcacttctcgatctggagtaccactgcaacggaattgat
gccacattgttattgtttattaaatatctagaagaagagaattccttgcgagggcaagtg
aagctcgcagtccatgttatgcgtttatgtcagataatgagaagatctggttcaaatgat
gtagtcaataatgacactcttgttgctttgctccttctattagaaggcaatatggcgttt
aacaacgtctatcttcgtcactacttgttctctattttacaagttctttcagggaggtcc
ccaacactttatggagttcctagagaatataaaacattgcatatgggagacacgggaact
ttcagtgaacagaaaaggatgttaacgtctatcattcctgaatttaacccaccagagcca
tcatcagtctctgcagttgcgcctatgccatgtattccagcaactctttcatcagaaccg
cttcatgttcccacaccgaggcctgacaacttggcagttcccgagctttccaaggaagaa
ggagcaattgcagaggatcctaagcaagctatggcaatagttgaagctccgagagaagca
gcctctgtttccagtagtcatgagaggaagttaccagttgttaagatcaaagtcagatca
tctgctgctacaagtagagcagatgctgataatctaaccactgaaagatcgcatgctgca
cctcgtgaaacagatgttggtcctagtagttctgtttctgttgatgcacccccaagaaat
actgctgaggctacaagtatcagcaaccgtattctggaggaggtaaactcctgtcacgat
cacgggtctcatatgacagccagcattggcagtgcaaaacttgcaagttatggtgatgaa
cttgggaaggaattccagtgcactgctgattccagcagtcgagcttttggacattttcag
ccagaagatccttcatcatcgagcatcatacaagataacaatattgatgctgatgcacag
aagtatgcaagtcttcagacactttctttaccacagcatgatcatggcttagcctcttcg
cactctcgccatgggaaaaaagaaaagaagaaagacaaagaaaagaaacgtaagcgagaa
agtcataaagaacatcgcaacgatcctgaatacattgagcgcaagcgactgaagaaagag
aagaaacaaaaagaaaaggagatggcaaagctattgaacgaagaggtgaagccacagcct
actgcaatgcctcgtataaaagaaccaccaaccaagtcaacacccgtgcaattggaaaca
aatgaacctagtggatcaagattaatcataggatcagttcatagtaagccggaggcatca
gaaggtacaacttctgctgcccccaaacttagaattaaatttaaaaaccgaacgttgaac
aattcataa
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