Cucumis sativus (cucumber): 101210846
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Entry
101210846 CDS
T02486
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101210846
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101210846
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
101210846
NCBI-ProteinID:
XP_004142600
UniProt:
A0A0A0LY60
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Position
1:30343229..30344905
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AA seq
399 aa
AA seq
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MAIIHLDNNHSLLSLILLVGLSSWSTFVDASSYNVVDFGGKGDGTTDSTQAFQTAWTNAC
ASTKKATIYVPRGRYCLQNVTFSGPCKNKAIIFRIDGSMEAPSDYLVIGNSAAWVVFRHV
DGMTILGGSLDGKGAALWACKNSSYNALCPTGATTLEFSNSKNVVVNNLKSLNSQMFHVA
INGCENVMVKGLRVSASSNSPNTDGIHVQSSSNVTIINSKIGTGDDCISVGPGVSNLQIQ
NISCGPGHGISIGSLGKDVKEIGVQNVTIKNVVFSRTENGVRIKTWGKPSNGFATDIVFQ
HIVMNNVHNPIVIDQNYCPTHKGCPGQASGIKISNVTYQDIQGTSTTKVAIMFDCSPTNP
CIGIKLENVSLTYKNQTAEARCNNARGIVVGQVQPTACL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcatccatcttgacaacaaccatagtttgctttcattgattttgttagttgga
ttaagcagttggagtacttttgttgatgcatcatcttacaacgttgttgactttggaggc
aaaggtgatggaacaactgactcaacacaagcatttcaaacggcatggactaatgcttgt
gcctccacaaaaaaggccactatttatgttccacgaggaagatattgccttcaaaatgta
acattcagcggaccttgcaagaacaaggcaatcatctttcgcattgatggcagtatggaa
gctccctctgactatctagttattggaaactctgcggcttgggttgtgtttaggcatgtt
gatggaatgactatcttaggtggtagtctcgatggaaagggagctgcgttgtgggcttgc
aagaattcttcttataacgctctttgcccaactggagccacgacccttgaattctccaac
tcaaaaaatgtggtggtcaataacctaaaatcacttaatagccaaatgttccatgtagcc
ataaatggctgcgaaaatgtgatggttaaaggccttagggtctcagcatcgagtaatagt
cctaataccgacggaattcatgtgcaatcatcctctaatgtgaccattataaattccaag
ataggaactggagatgattgcatttcagttggtcctggtgtttctaacttacaaattcaa
aatatttcctgcggacctgggcatggaataagcattggtagtctcggaaaagatgtaaaa
gagattggggtgcaaaatgttacgataaagaatgttgtattttcacgcactgaaaatggg
gtacgaatcaaaacatgggggaagccaagcaatgggtttgctactgacattgttttccag
cacattgtaatgaacaatgttcataatccaattgttatcgatcaaaattattgtccaact
cacaaaggctgtccaggccaggcttctggaattaaaattagtaatgtgacataccaagac
atccagggaacatcaaccactaaagttgcaatcatgtttgattgtagtccgacaaatcca
tgtattggaataaagttagagaatgtaagtcttacgtataagaatcaaacggccgaagct
agatgtaacaatgcaagaggaattgtagttggtcaagttcaacccactgcttgtctctga
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