Cucumis sativus (cucumber): 101210892
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Entry
101210892 CDS
T02486
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101210892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csv03041
]
101210892
Spliceosome [BR:
csv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101210892
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Ortholog
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GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
101210892
NCBI-ProteinID:
XP_011655634
UniProt:
A0A0A0KSD2
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Position
5:complement(25791569..25795024)
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AA seq
484 aa
AA seq
DB search
MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT
QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLA
ALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS
TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK
IRKN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctactttggctgattcctttctagcagatcttgatgaactctctgatgaagacaag
tttcagggtgaagcaggtgccgatgccgaaaatatggaagaggatattgatggggacctt
gccgacctagaaagccttaattatgaggatctggatagtgtatcaaaactgcagaaaaca
caaagatacaatgatattatgcagaaagttgaagatgcattgcagacggattctaatatc
tcaaatcagggatttgtattggaagatgatcctgagtaccaattgattgtagagtgtaat
gccttgtcagtggatattgagaatgaaattattattattcacaactttatacgagataaa
tatcgactgaaatttccagagcttgaatcacttgtgcaccatccaatcgattatgctcga
gttgttaagaagattggaaatgaagtggatttgactcttgtagatttagaaggactttta
ccttctgctgttattatggttgtttctgtcacagcatctacaacaagtggaaagccactt
ccagaggaaattctccagaaaacaattgatgcatgtgatcgagctcttgccttagattca
gcaaagaaaatggtccttacttttgttgaaagtagaatggggcatattgcaccaaatctt
tcagccatagttggaagtgctgttgcagcaaaactaatgggaactgctggtggtcttgct
gctttagctaagatgcctgcttgcaatgttcagcttcttggtgcaaagagaaaaaatctt
gctgggttttccacagctacctcacaatttcgagtaggttatattgagcaaacagagata
ttccaatcaacacctccacctttgaagatgcgtgcttgtcggctcatatctgcaaagtca
acacttgcagcacgagttgactccaccatgggagatcctactgggaagactggcagagtc
ttcaaagatgagattcttaaaaaaattgaaaaatggcaagaacctccgcctgcaaaacaa
ccaaaacctcttccggtccctgattccgagcctaaaaagaagagaggtggccgtcgatta
agaaagatgaaggaaagatatgcaacaacggagatgaggaagctagctaacaggatgcag
tttggggtgcctgaagagagttcgttaggagatggattgggggaaggatatggaatgctt
ggtcaggctgggagtgggaagttacgtgtatcggctgctcagagcaagcttgctgcaaag
gttgttaagaagttcaaggaaaaacgctatggaagcagtggtgctacgtctgggctgacc
tcaagtttggcatttactcctgtacaaggaatcgagctgtcaaatcctcaggcccatttg
aaccagctagggagcggcactcaaagcacctacttttctgaaacaggaacattttcaaaa
attaggaaaaactga
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