Cucumis sativus (cucumber): 101210933
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Entry
101210933 CDS
T02486
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101210933
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101210933
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
ZirS_C
Motif
Other DBs
NCBI-GeneID:
101210933
NCBI-ProteinID:
XP_011652824
UniProt:
A0A0A0LCF2
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Position
3:25848097..25849705
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AA seq
399 aa
AA seq
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MMIIQFEKRSSLALLIVLVALINLCTFSNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNAC
ASTKPTTIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHV
DGVTISGGNLDGKGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIV
IHGCQNVMMKGLKVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLHIE
NIICGPGHGISIGSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQ
HIVMDNVQNPIVIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKVAVKFDCSPINP
CVRIKLDNVKLTYMNQTAQATCNNVGGIAAGLVQPTSCF
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcatccaatttgagaagaggagtagtttggctctattgatcgtgttggtagca
ttgataaatttgtgtacttttagcaatgcatggtcttacaatgttgttaactttggagcc
aaaggtgatgggagaactgactcaacacaagcatttcaaaccgtttggtctaatgcttgt
gcctccacaaaaccaaccacaatttatgtcccacgaggaagatattaccttcgctctgga
actttcaacggaccttgcaaaaataatgctatctttatccgcattgatggcactttggtg
gctccctccgactttcaagttattggaaactctgcagcttgggttgtttttaggcacgtt
gatggagttaccatctcaggcggcaatcttgatgggaagggggctggcttatggacttgc
aaaaattcttctattagcactacttgtccatctggtgccacgaccctccaattctctaac
tccaaaaatgtagtggtcagcgcattaacatcactcaatagccaaatgttccatatagtc
atccatggttgtcaaaatgtcatgatgaaaggccttaaggtcttggcctctggcaatagt
cccaacacagacggaattcatgtgcaaatgtccactgatgtggccatattaaactccaaa
ataggcactggagatgattgcatttccattggtcctggtacttctaacttacatattgaa
aatattatatgtggacctggtcatggaataagcattgggagtttagcaaaggatctacaa
gaggatggagtccaaaatgttactgtgaagaatgttgtattttcacgcactcaaaatggg
gtaagaatcaaagcatggggcaagcctagcaacggttttgctaggaacattcttttccaa
catattgtaatggacaatgtccaaaatccaattgttatcgatcaaaattattgtccaagc
cacaaaggatgtccggaaaaggcttctggtgttaaaattaacgatgtgacttatcaagac
atccatggaacatcagccactaaagttgcagtaaagttcgattgtagtccaataaatcca
tgtgttcgaataaagttagataatgtaaaacttacatatatgaatcaaacagcgcaagct
acatgcaacaatgttggaggaattgcagcaggtcttgttcaacccactagttgcttctaa
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