Cucumis sativus (cucumber): 101211201
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Entry
101211201 CDS
T02486
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101211201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csv03032
]
101211201
Enzymes [BR:
csv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101211201
DNA replication proteins [BR:
csv03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
101211201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF7792
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
101211201
NCBI-ProteinID:
XP_011649321
UniProt:
A0A0A0LPU1
LinkDB
All DBs
Position
2:13765531..13777230
Genome browser
AA seq
1547 aa
AA seq
DB search
MADEQPSASNRRRSRGSEAAARLTALERLKAIRSGGRRSEAGGFQVKLENPIYDTIPEDE
YDALVAKRREEVRGFIVDDDGLGYGDEGEEEDWSKAGVCFSDESDGELDKPKKRKVVKKE
TQPKKPSSSSLTAAAAMMGKQKLSSMFTSSIFRKTGRDDKAKGLGCDSIVDDVIAEFAPD
ETDRERRRKGQIGAIPILRTVTSVPAVKSEGFTARGLNLTGESDFIKDAENGNSETTRVV
TNSDLESVRGGVEVQGNGETKEFDSKDLNSQINLDPVEQLPNSLIKEDVSGDTMPIKVET
KAEPLVKKEPVSTLNAKISNERDPALSATAEWQAVRSEGSGSVNSAAEMAEEKSEFDTDT
DGSLPFYIVDAHEELFGANMGTVYLFGKVKAGDTFHSCCVVVKNMQRCIYAIPSASFLHS
DEMLELQKDAEESQLSPADLRAKLQEVTAGLKNEMAKQLLDLNVSTFSMTPVKRKYAFER
QDIPAGENYVIKINYPFKHPPLPADLKGELFCALLGTHRSALELLLIKRKIKGPSWLSIS
KFSSRPASQRVSWCKFEVIVDSPKDVQTSTSSSKNLEIPPMIVTAINIKTIINERQSVNE
IVSASVICCQRAKIDGPMLATEWKKPGMLRHFTVIRKLDGGIFPMGFAKESTDRNSKAGS
NVLICEGNERALLNRLMIELFKLDSDVLVGHNISGFDLDVLLHRAQFCRVPSSMWSKIGR
LKRSVMPKLGKGGNIFGSGASPGLMSCIAGRLLCDTYLSSRDLLKEISYSLTELAKTQLN
KDRKEVTSHEIPKMYQASESLMNLIEYGETDAWLSLELMFHLSVLPLTRQLTNISGNLWG
RSLQGARAQRVEYLLLHAFHAKKYIVPDKNSSYVKDKKIVKKRTNHGSEEKNVDQFDLDD
GNVEAPNTDSGKGKKGPSYLGGLVLEPKRGLYDKYVLLLDFNSLYPSIIQEYNICFTTVE
RSPDGVIPPLPSSRVTGVLPELLKNLVQRRRMVKSWMKNASGLKLQQLDIQQQALKLTAN
SMYGCLGFSNSRFYAKPLAELITSQGREILQSTVDLVKNNLSLEVIYGDTDSIMIHSGLD
DVGKVKAIAGKVIQEVNKKYKCLEIDLDGLYKRMLLLKKKKYAAVKLQFKDGMPYEVIER
KGLDMVRRDWSLLSKELGDFCLNQILSGGSCEDVVESIHDSLMKIQEDMRKGQVALEKYI
ITKTLTKPPEAYPDARNQPHVQVAQRLKQMGYTTGCSVGDTIPYIICCEQESTSGGSTGI
AQRARHPDELKKEDGKWMIDIEYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFQ
NRSIEVSRSDISTSLLCSVNDEERYQGCTPLTFTCPSCSGTFNCPPIFSSIYKSAEGKQE
RLVDEPTTKFWNNLRCPKCPDEANAGRITPGMIANQVKRQADRFISMYYNGLMMCDDETC
KYATRAVNLRVMGDSEKGTICPNYPHCNGHLVRKYTEADLYKQLSYFSHILDTERCMEKL
EVHARVTLEKEMASIRPVVELAATTIQSIRDRSAYGWVQLQNFVVTF
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaacagccctcagcttctaatcgtcggaggagcagaggatctgaggctgcc
gcccgacttaccgctctcgaacgtctcaaagccatccgcagcggtggccgtcgatcggaa
gccggtggtttccaagtgaagttggaaaatcctatctacgatacgattccagaggatgag
tatgatgctctcgttgcaaagcgacgcgaggaagtccgagggtttattgttgatgacgac
ggtcttggatatggagatgaaggtgaggaagaggattggtcgaaagctggggtttgtttt
tcagatgagtctgatggtgagctggacaaacctaagaagaggaaagtggtgaagaaagag
acgcaaccgaagaagccctcttcttcttctttaacggcggcggcagcgatgatggggaaa
caaaagctttcttcgatgtttacttcatccatcttcaggaaaacgggtagagacgataag
gctaaaggattgggttgtgatagtattgtggatgatgtgattgctgaatttgctccagat
gagactgatagggagaggcgtagaaaggggcaaattggagctataccgattttgaggact
gttacgtctgttcctgccgtgaagtccgagggattcactgctcggggtcttaatttgact
ggtgagtctgacttcatcaaggatgctgaaaatgggaactcggaaacgaccagggttgtt
acaaacagtgatttggagtctgtacgaggtggtgtggaggtccagggaaatggtgaaact
aaggaatttgattcaaaggacttgaattctcaaatcaacttggatccggttgagcaatta
cctaattctttgatcaaggaagatgtaagtggagacactatgccaattaaagttgaaaca
aaggcagaaccgttggtgaagaaggaaccagtgagtactttgaatgctaagattagcaat
gaaagagacccagctttgagtgctactgcggaatggcaggcagtaaggagtgaagggagt
ggaagtgttaattctgcagcagagatggctgaagagaaatccgaatttgataccgacact
gacggctctcttcctttctatatcgttgatgcacatgaggagctcttcggtgcaaatatg
ggcactgtatatctatttgggaaggtcaaagctggggatacgttccacagttgttgtgtg
gtggtgaaaaatatgcaaagatgcatatatgccattccaagtgcttcttttctccattcg
gatgagatgttggagctccagaaggatgctgaagagtctcagctttctcctgcagacctg
cgtgccaaattgcaagaagtgactgcaggattaaaaaatgaaatggctaagcagttgcta
gacctcaatgtttcaacatttagcatgacaccggttaagaggaaatatgcatttgagcgt
caagacatacctgcaggggagaattatgtgattaagattaattacccattcaagcacccc
ccacttcccgctgatctaaaaggagaattgttctgtgctcttttaggaacacatcgcagt
gccttagagcttctcctcattaaaaggaaaattaagggcccctcctggttgtcaatttca
aaattttcttctcgtcctgcttctcaacgagtgagctggtgcaagtttgaggtgatagtt
gactctccaaaagatgtgcaaacttcaacgtcatcaagcaaaaatttggagattcctcct
atgattgtcactgcaataaacataaagaccatcattaatgaaaggcagagtgtcaacgaa
attgtgtctgcatctgtcatatgctgtcaaagagcaaagattgacggtcccatgttggcc
acagaatggaagaagcctggtatgctaaggcattttactgtcatccgtaagcttgatgga
ggcatatttcctatgggatttgctaaagagtccactgatagaaattcgaaggctggatca
aatgttctgatctgcgagggcaatgaaagggccttgttgaataggttaatgatcgaatta
ttcaaattggatagtgatgtgctggttggacacaatatctctgggtttgatttagatgtt
cttctccatcgagcacagttttgccgagtaccaagcagcatgtggtccaaaataggccgc
cttaagcggtctgtaatgccaaaacttggaaagggagggaacatttttgggtctggagca
agtccaggactcatgtcttgcattgctggtcgactcttatgtgatacgtacttgtcttcc
cgtgacctattgaaggagataagttattctttgacagagctagcaaaaactcaacttaat
aaggaccgcaaggaagtcacttcacatgaaattccaaaaatgtaccaggcatccgagtct
ctcatgaacctgattgaatatggtgagacagatgcatggttgtcattggaactcatgttt
catttaagtgttcttccccttactcgacagttaactaatatcagtggtaacctctgggga
agaagtctacagggtgctagagcccagagagtagagtatctcttacttcatgcattccat
gccaaaaaatatattgtccccgacaagaattcatcttatgtgaaagataaaaagattgta
aaaaagagaacaaatcatggatctgaggaaaaaaatgttgatcaatttgatttggatgat
ggaaatgtagaagctcccaatactgacagtggaaagggcaaaaagggaccctcctattta
ggtgggctagtcttggagccaaagcgaggtttatatgataagtatgtattgctcctggac
tttaacagtctgtacccttctatcattcaggaatataatatttgctttaccactgttgaa
agatccccagatggtgttattcctcctctgccatctagtagagtgacgggagttcttcct
gagttgcttaaaaatctggttcagagaagaagaatggtgaagtcatggatgaagaatgcc
tctggtctcaagcttcagcaacttgacattcagcagcaggcactaaagctcactgcaaac
agtatgtatggatgtctagggttttctaattcaaggttttatgcaaaaccactagcagag
cttattacttcacagggaagagaaatactgcagagcactgttgatcttgtcaagaataat
ctaagcctagaggtaatttatggcgatacagattcaataatgattcacagtggactggat
gatgttggcaaagtaaaagcaattgcaggaaaagttatacaagaggttaacaaaaagtac
aagtgcttagaaattgatctcgatggtttgtacaagagaatgttgcttctgaagaaaaag
aagtatgctgctgtaaagttgcagtttaaggatggaatgccatacgaggttattgagcgt
aagggtcttgatatggttcggcgtgactggagtttattgtcaaaggaattaggtgatttc
tgcttgaatcaaatattgtctggagggtcatgcgaggatgtcgttgaatcaatacatgac
tcacttatgaagatccaagaggatatgaggaaagggcaagttgcacttgagaaatatatc
atcacgaagacattgactaagccacctgaagcatatcctgatgccagaaaccaaccacat
gttcaagttgcacaaaggttaaaacaaatgggttatactactggctgttctgttggtgac
acgatcccatatataatttgctgtgagcaggagtctacttctggtggttctacaggcatt
gctcagcgggctagacatcctgatgaattgaaaaaagaggatggaaaatggatgattgac
atcgaatactatctttcacagcagattcacccagtggtctctcgtctatgtgcctcaatt
cagggcaccagcccagaacgcttggctgattgtctggggcttgattcatcaaagttccaa
aacagatcaattgaagtttcccgaagtgatatctccacttccctcctgtgttctgtaaat
gatgaagaaaggtatcagggatgcacaccgctgacattcacttgccccagctgttctggt
acttttaattgtcctcctatctttagttccatatacaaatctgcagaaggaaagcaagaa
aggctagttgatgaacctacaaccaaattttggaataatttgcgttgtccaaaatgtccc
gacgaagctaatgcgggtagaataactcctggaatgattgccaaccaggtgaaaaggcaa
gcagataggttcatttcaatgtattataatggcttaatgatgtgtgatgatgaaacctgc
aaatatgccacacgtgccgttaatcttcgagttatgggcgactctgagaaaggaaccatc
tgcccaaactacccccactgcaatgggcatctagtaagaaagtacacagaagccgatttg
tacaagcagctttcatattttagtcacattttggatactgaacgctgtatggaaaagttg
gaggttcatgcaagggtaacattagagaaagaaatggcgagtattcggccagtagtcgag
ttagctgcaacgacaattcaaagcattcgggatcggagtgcatatggctgggtgcagttg
caaaattttgtagtaacattttga
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