KEGG   Cucumis sativus (cucumber): 101211228
Entry
101211228         CDS       T02486                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03020  RNA polymerase
csv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101211228
  09124 Replication and repair
   03420 Nucleotide excision repair
    101211228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csv03021]
    101211228
   03400 DNA repair and recombination proteins [BR:csv03400]
    101211228
Transcription machinery [BR:csv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     101211228
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101211228
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9
Other DBs
NCBI-GeneID: 101211228
NCBI-ProteinID: XP_031737720
LinkDB
Position
3:11202293..11204616
AA seq 114 aa
MSTMKFCRECNNILYPKEDRDEKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQ
DVAADPTLPRTKAVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtaccatgaagttttgccgggaatgtaacaacattctctatccgaaggaggataga
gatgagaagattcttctctatgcctgtcgcaactgtgatcaccaggaagtcgctgacaat
aactgcgtctataggaatgagattcatcatgctgtaggagaacgcactcaagttttgcaa
gatgttgctgcagatccaactctccctcgcactaaagctgtccgatgtgctcaatgcaac
catggagaagctgttttcttccaggccactgccagaggagaggaaggtatgacattgttc
ttcgtttgctgcaatccaaattgtggccacagatggagagattga

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