Cucumis sativus (cucumber): 101211286
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Entry
101211286 CDS
T02486
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csv03009
]
101211286
Enzymes [BR:
csv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
101211286
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101211286
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
101211286
NCBI-ProteinID:
XP_004148920
LinkDB
All DBs
Position
7:complement(6380493..6385917)
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AA seq
611 aa
AA seq
DB search
MAATKFNKKKVVKRDDPSSKRKKKDELFTPKRSKEEEDDSDLSDALAEEEVDNGLIDSDE
EGSGSGSEDSSDGDDPLAHDFLQGSDEDEENDSGSVSSSDSDETDIEDKSRIIDEKRARE
EKDAADEMQLNIKDESDEFRLPTKEELEEESLRPPDLSSLQRRIREIVRVLSNFKALRQE
GATRKDYVEQLKKDIGSYYGYNEFLIGVLVEMFPVVELMELIEAFEKPRPICLRTNTLKT
RRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQGASSFLPVMA
LAPQEKERIVDMAAAPGGKTTYIAALMKNSGMIFANEIKAQRLKSLTANLHRMGVTNTVV
CNYDGKELPKVLGMNTADRVLLDAPCSGSGVVSKDESVKTSKSLEEIQKCAELQKQLILA
AIDMVDSNSKSGGYVVYSTCSIMVDENEAIVDYALRKRDVKLVPCGLDFGRPGFIRFREK
RFHPSLEKTRRFYPHVHNMDGFFVAKLKKMSNKIPSAKSSESLNEAVEEDDDDTKKVGNE
KNDGECLHPQLNDGGKGKKGSQNHVVGNGKESKPTVERSKKRKFPSREEISRAREEKRQA
LRVKKHGSKKG
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaccaagttcaacaagaagaaggttgtgaaacgggacgacccttcatcgaaa
aggaagaagaaggacgagcttttcactcctaagcgttctaaggaggaagaggatgactct
gacctttctgatgctctggctgaggaagaagtagataatggactgattgatagtgatgaa
gaaggatctggttctggttctgaagattcttcggatggtgatgaccctttggctcatgat
ttcctccaaggaagtgacgaagatgaagagaatgattcaggctcggtttcaagttctgat
tctgacgaaaccgacatcgaagacaagtcgagaattatcgatgagaaaagggcgagggaa
gaaaaggatgcagcggatgaaatgcagctcaatattaaagatgagtccgatgagttcaga
ttaccaaccaaggaggaacttgaggaagagtcgcttagacctcctgacctttcaagttta
caaaggcggataagagagattgttcgagttctttcgaatttcaaggctttgaggcaagag
ggagcaacccgtaaggactatgttgaacaacttaagaaagatattggttcgtactatggg
tacaatgagtttcttattggggtgctggttgagatgtttccagtagttgagctaatggaa
cttattgaagcttttgaaaagcctagaccgatatgtttgcggactaacaccttaaagaca
agaaggcgggatttggctgatgttctgattaacagaggtgtaaacttagatcctttgagc
aagtggtcaaaggttggacttgttgtatatgattcccaagttccaattggagcaactcct
gaatatatggctggtttttacatgctacaaggtgcgagctcctttctgcctgtaatggcc
cttgctcctcaagaaaaagaacgaattgttgacatggcggcagcacctggtggtaaaact
acttacatagcggcactcatgaaaaatagtgggatgatatttgcaaatgaaattaaagca
caaagattgaagtcacttactgcaaatttacatcggatgggagtgacaaatactgttgta
tgcaactatgatgggaaggagctcccaaaagtattgggcatgaatacagctgatagagtt
ctattagatgccccttgcagtggatctggagttgtatccaaggatgaatctgttaaaacc
tcaaaaagcttggaagaaatccagaaatgtgctgagttgcagaagcaacttatacttgct
gcaattgacatggttgattcaaattcaaaatctggaggatatgttgtttactccacatgc
tccataatggttgatgagaatgaagcaattgttgactatgcacttagaaagagggatgtg
aagcttgtgccatgtggccttgattttggacgtcctgggtttatccggttcagggaaaaa
cgtttccacccatctttagaaaagacaagacgtttctaccctcatgtccacaacatggat
ggtttttttgttgcaaagttgaaaaaaatgagcaacaagattccatctgcaaaatcttcg
gaatcattgaatgaggctgtggaagaagatgatgatgacacaaagaaagttggaaatgag
aagaacgacggtgaatgtcttcacccacaattaaacgacggtggaaagggaaagaagggt
tcacaaaaccacgtggttggcaatggcaaagaatccaagcccactgtggaaaggagtaag
aagagaaaatttccttcaagagaggaaatttcaagagctagggaggaaaaacgacaagct
ttgagggtaaagaaacatgggagcaagaaagggtaa
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