Cucumis sativus (cucumber): 101211341
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Entry
101211341 CDS
T02486
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101211341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101211341
03036 Chromosome and associated proteins [BR:
csv03036
]
101211341
Transcription machinery [BR:
csv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101211341
Coactivators
SAGA/TFTC/STAGA complex
101211341
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101211341
STAGA complex
101211341
TFTC complex
101211341
SAGA complex
101211341
SLIK complex
101211341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
101211341
NCBI-ProteinID:
XP_011659626
LinkDB
All DBs
Position
7:complement(21796243..21801964)
Genome browser
AA seq
668 aa
AA seq
DB search
MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALVQ
SPSIDHLHPLAQISSPPLSHISLPQNQQQQPQQQLSPAVGLDYQQKPIQQQQQQQQQQQQ
QQQQLVQQPQNASAMTNFQIQQALQRSPSISRLNQMQPQQQQQQQQQFGMMRQQSGLYSQ
MNFGGASTNQQQQQQQQQPNQQQQMGTGNLSRSTLIGQGNHLPMLSGAAQYNLPSQLLAS
SKQKAGLVQGPQFQSSNSHGQALQGIQAMGMMGSMNLPSQLRANGLASPYAQQRINQGQI
RQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSMS
NPGSPSFRLQRQQVLLHQQLASSNQLHQNSMSLNPQQFPQIVQQQSSMGHQQLHQQHQQQ
QQQPQSQQQQPQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAGQKSLS
LTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLLEI
ADDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNLSSSD
VHKKRLDMIRILKEASCVETNVNSPKEMVRQGVGMSIGPNTLTRPSPSSEQLLSQTAGSQ
LLQQMMRF
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagtacttcgtcgcctagaccggttcaaccgaacccgatggacccttcacca
ccaccgccgcaacaacaaccgcaagttcaaccttcaacaaccgctattcctcaaaattca
tcaaatccgtcaaattcctctgtgaatcctcccattccatctccttctgcacttgttcaa
tcgccttcgattgaccatttacatccgctagctcaaatctcttctcctcctctttcgcac
atctctcttccgcaaaatcaacagcaacagccacagcaacagttgagtcctgcggttgga
ttggattaccagcagaagcctatacagcagcagcagcagcagcaacaacaacaacagcaa
caacagcagcaattggtgcaacaacctcagaatgcgagtgcgatgacgaatttccaaatc
cagcaagctttacagcgttctccttctatttctcggttgaaccaaatgcaaccacagcag
caacagcagcagcaacagcagtttgggatgatgagacaacaatcggggctttatagtcag
atgaattttggtggggcttctacaaaccagcagcaacaacaacagcagcaacagcctaac
caacaacagcaaatgggaactgggaatctgtcgcggtctacattaatcggtcagggtaac
catttgcccatgttgtctggagcggctcagtataatttgccgtcacaattactggcttcg
tcaaagcagaaggctggattagttcagggtccacaatttcagtcaagtaactctcatggg
caagctttgcaaggaattcaagcaatggggatgatggggtcaatgaatttgccctcacaa
ctaagagctaatggccttgcctcgccgtatgcccaacagagaataaaccaaggtcaaata
aggcagcaattatctcaacaaagttcactcacctctccacaggttcagaacttaccgaga
atgtcaaatcttgcatttatgaatcaacaattgaccaatttggctcagaatgggcagcca
accatgatgcagaactctttgcaacagcaacagtggctaaagcaaatgccatcgatgtct
aatcctggctcaccttcatttcgtctgcagaggcaacaagtcttgttacaccagcaactg
gcttcgtctaatcaattgcatcaaaactccatgtcgttgaaccctcaacaatttcctcag
attgtacagcaacagtcatccatgggacatcaacagttgcatcaacaacatcaacagcaa
cagcagcaaccacagtcacaacaacaacaaccacaacaacagctacaacagcagccactt
catcaacaacagcagctacttcaacaagcatcaccacagcaatctctgcaaccagtattg
catcagcatcagcagcattctcctagaatagctggacttgcgggccagaaatctctcagt
ttgactggatcacatccagatgccacagcatctggcgctagtacaccggggggaagttca
agccaagggacagaggctgcaactcaagtccttgggaagagaaagatacaagatctggtt
tcacaggtagatccacatggaaagctggaacctgaagttgaagaccttctcttggagatt
gccgatgattttatcgattcggttactaccttttcatgcaatttggcaaaacatcgaaaa
tcctcaactttagaatccaaagatttattgctacacttagagaagaattggcagttgaac
gttcctggatattcaagtgatgagtggaagaatcacaacaaaaatttatcatcaagtgat
gtccacaagaaacgattggacatgatacgcatattgaaggaagcatcctgtgtggaaaca
aatgtaaacagccctaaagagatggtacgacaaggggttggaatgtccattggtcccaac
actctaacaaggccttcaccgagttcagaacaactattatcacaaacggctggttcacag
ttgctgcagcaaatgatgaggttttag
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integrated database retrieval system
