Cucumis sativus (cucumber): 101211350
Help
Entry
101211350 CDS
T02486
Name
(RefSeq) protein SPA1-RELATED 2
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101211350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csv04121
]
101211350
Ubiquitin system [BR:
csv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
101211350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Pkinase
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
WD40_like
PK_Tyr_Ser-Thr
WDR54
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
101211350
NCBI-ProteinID:
XP_011654705
UniProt:
A0A0A0KNS6
LinkDB
All DBs
Position
5:1291580..1298934
Genome browser
AA seq
1060 aa
AA seq
DB search
MEEMSEDMTLLDATEDAHVQNKVRQDAQENEYVLKPENNNVVESQEMVTPVDGGYSQYYP
HEFTDILEGKNLNRCKNNLKLSDQPECSPHCMDDAGVMVEELTVKNHNGSNLAIIGPSDN
RARLLSRHSQWQHLYQLGSGSGSGSSRIDTSYKNHGLAVTPGLENGGYTSFPEAFAGRAS
RNDCGEELEEMKAVDNKGGDAQGSIRTKILSKSGFPEFFVKSTLKGKGIIRRGVQLEGFN
VEHRNPKNARIAGGITLASDSSLQHDVKPVIPALYRKSEHKHRGSSLDGISLREWLKVPN
QKVNKIKCLYIFRHVVELVERSHGRGVLLHDLRPSSFRILTTNQVRYVGTFIQSKTPESL
MVKDGQCSDSHLTRKRPLEQGNFLSFGGSPKKQKDAQNMSLMARHSYFPFKSGTSLETAN
TRDCNKNVSENYNEHFVEQGGWNKPAGLRAYDSAQTSASDLLEESWYVSPEELMTGCCSA
KSNIFSLGVLLFELLGKFESDGALAAAMSNLRDRILPPSFLADNLKEVGFCLWLLHPEPA
SRPTAREILESELINGMPSVPEPELSTSIDEEDAESELLLQFLTSLNEQKQKQASKLVED
IRYLESDIEEVNKRHSSAKPVDKSGLSTVDGRDDLILHGGYLNSDMCPQVYRISHTNEER
IAKNISQLEGAYFSMRSKVDPSENDSAIRTDNDLLRARENCYLPQKDDEMSHSDRLGAFF
DGFCKYSRYSKFEVRGVLRNGDFNSSSNVICSLSFDRDEEYFAAAGVSKKIRIFEFNSVF
SDSVDIHYPAVEMFNRSKLSCICWNGYIKNYLASTDYDGVVKLWDATVGQEVSQFNEHNK
RAWSVDFSQVHPTKLASGSDDCSVKLWSINEKNCLGTIRNIANVCCVQFSAHSTHLLAFG
SADYRTYCFDLRNTKAPWCVLGGHEKAVSYVKFLDSGTLVSASTDNTLKLWDLNKTNPTG
LSTKACSLTFSGHTNEKNFVGLSVSNGYIACGSETNEVYAYHRSLPMPMTSYKFGSIDPI
SGKETEDDNGQFVSSVCWRGKSDTVIAANSSGCIKVLQMV
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatgagcgaggatatgacgctattggatgcgactgaggatgcacatgtccaa
aataaggtcaggcaagatgctcaggagaatgagtatgtgctgaaacctgaaaataacaac
gtagttgaatcacaggaaatggttacacctgttgacggcggctattcacaatattatcct
catgaatttactgacatcttagagggcaagaatctgaataggtgtaaaaacaatttgaaa
ttatctgatcaaccagaatgtagtcctcattgtatggatgatgctggcgttatggttgaa
gagttaactgtgaagaatcacaacggttccaatttagcaattataggtccatcagacaat
agagcaaggctgctttctaggcatagtcagtggcaacatctttaccagcttggaagtggt
tcaggaagtgggagttcacgtatagatacttcttacaaaaaccatggtctggcagtaacc
cctggcttggagaacggtgggtacacatcttttcctgaggcttttgctggaagagccagt
cgtaatgattgtggagaagaattggaagaaatgaaggctgttgacaataagggtggtgat
gctcagggcagcattcggaccaagattctatcaaaatctggttttcctgaattttttgtt
aaaagtaccttaaaaggcaaggggatcattcgtagaggtgtacaactggagggctttaat
gttgaacatagaaaccctaagaatgcgaggattgctgggggtattacattggcatctgat
tcatctttacagcatgatgttaagcccgtcattcctgctttgtataggaaatctgagcat
aaacatcggggttcttctttagatggcattagcctgagagaatggcttaaggttcccaac
caaaaagtaaataaaattaaatgcttgtatatatttaggcatgtagttgagctagtggag
cgttctcatggtcggggggttttgttgcatgacttacgtccatcttctttcaggatattg
acgacaaatcaggtaaggtatgttggaacttttattcaaagtaaaactccagaaagccta
atggttaaagatggtcagtgttcagatagccatctgactcggaaaaggccattagagcaa
gggaactttctgtcatttggtggatctccgaaaaaacaaaaagatgcccagaatatgagt
cttatggcccgacactcttattttccttttaaatctggtaccagtcttgaaactgcaaac
acaagggactgcaataaaaatgtttcggaaaactacaacgaacattttgtggaacagggg
ggttggaacaagcctgctggccttcgagcttatgattctgcccagacttcagcaagtgac
ctattggaagagtcatggtatgttagtccagaggagcttatgacaggatgctgctcagct
aaatcaaacatattctctcttggcgttcttctttttgagttacttggaaagtttgaatca
gatggtgcacttgctgcggcaatgtcaaatttgcgtgacaggattcttcctcccagcttt
ctagctgataatttgaaggaagttggtttttgtctttggttgcttcatcctgaacctgca
tctcgtcctacagcaagggaaattttagaatcagaactaattaatggaatgccaagtgtt
ccggaaccggagctctcaacatctattgatgaggaagatgctgaatcagagttattattg
cagtttctcacatcattgaatgagcagaagcagaaacaagcctcaaagttggtggaagac
atacggtatttagaatcagatattgaagaagtcaataaaaggcacagttcagctaaaccc
gtggataagtctggcttgtctactgtggatggaagggatgatttgattcttcatggagga
tatttaaattcggatatgtgccctcaggtatatagaatatcacataccaatgaagagaga
atagcaaaaaacataagtcagcttgaaggtgcctatttttccatgagatcaaaagtagat
ccttctgagaatgactcagcaattcggacagacaacgatttactgagagctcgggaaaac
tgctatctaccacaaaaagatgatgagatgagtcacagtgatcgtctgggtgcctttttt
gatggattttgcaagtattctcgctatagcaagtttgaagtacgtggagtactgagaaat
ggtgattttaacagttcctcaaatgtaatttgttccttgagttttgatcgggatgaggaa
tattttgctgctgctggagtgtcaaagaaaataaggatttttgagtttaactcagtcttt
agtgactcggtagatattcactatcccgcagttgaaatgtttaatagatcaaagcttagc
tgtatttgctggaatggctacatcaagaactatttggcttcaactgattatgatggtgtt
gttaagttatgggatgcaactgtaggtcaagaggtttctcaattcaatgaacacaataaa
agggcgtggtctgttgacttttcacaagtgcatcctacaaaattggccagcggaagtgat
gattgttctgtgaaactttggagtattaatgagaagaactgtttgggcacaattaggaac
atagcgaacgtctgctgtgttcagttctctgctcactcaacccatttgctggcttttggg
tctgctgattacagaacatattgctttgatctacgcaatactaaagctccttggtgtgtg
ttgggtggccatgagaaagctgtaagctatgtgaagttcttggactctgggaccctcgtt
tctgcatccacagacaacacgttgaagctatgggatcttaataaaaccaatcctactggc
ttgtctacaaaagcttgcagtttaactttcagcggccacactaatgaaaagaatttcgtg
ggtctatcagtttccaatggctacatagcttgtggttcagaaacaaacgaagtatatgcc
taccatagatctctgcccatgccaatgacttcctacaagtttggttctatcgaccctatt
tctggaaaagagactgaggatgacaatggacagtttgtttcaagtgtatgctggagagga
aaatccgacacggttattgcagccaactcaagtgggtgtataaaagtactgcaaatggtt
tga
DBGET
integrated database retrieval system