Cucumis sativus (cucumber): 101211358
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Entry
101211358 CDS
T02486
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03030
DNA replication
csv03420
Nucleotide excision repair
csv03430
Mismatch repair
csv03440
Homologous recombination
csv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101211358
03420 Nucleotide excision repair
101211358
03430 Mismatch repair
101211358
03440 Homologous recombination
101211358
03460 Fanconi anemia pathway
101211358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csv03000
]
101211358
03032 DNA replication proteins [BR:
csv03032
]
101211358
03400 DNA repair and recombination proteins [BR:
csv03400
]
101211358
Transcription factors [BR:
csv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101211358
DNA replication proteins [BR:
csv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
101211358
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
101211358
MMR (mismatch excision repair)
101211358
DSBR (double strand breaks repair)
HR (homologous recombination)
101211358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
zf-CCHC
zf-CCHC_3
DUF223
zf-CCHC_5
CDC24_OB3
DUF936
Motif
Other DBs
NCBI-GeneID:
101211358
NCBI-ProteinID:
XP_004146122
UniProt:
A0A0A0L503
LinkDB
All DBs
Position
3:835289..839687
Genome browser
AA seq
861 aa
AA seq
DB search
MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH
FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPV
SATRSSANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYSNPP
ETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARP
QPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGD
GKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYE
IFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKN
GTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGK
AVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKDE
RLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV
DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKV
LFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPKA
ESTIHNFGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTPL
NSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGHWA
RDCPGLANVPPAYGNRGFTAR
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcaatggcgtcgtctaagctaacggaaggagcagtgatggtgatatgcaag
agggaatcgtctgctgagacgttccagccgattctacaagtgattgatttgaaattggtt
aacacttcgcaacaatcaggtagcgagaggttcagattgttggtttctgatggaacccat
ttccagcaaggaatgctgggcactcagctcaacgaattggttaagtctgggaagttacag
aaaggttctatcgttcgactgcggcagtatgtttgtaaccccgttcaagaacgcctgatt
ataattgtcattgagttggatgtgatagaggaaatgtgtgacattattggtgaacctgta
tcagccacaagatcgtcagctaatgcattaagtggaaaccccctaccctctgtggggggt
ctgggggcttcacctggtagtggaatgattggtaagggaaatgtatcgagtgcgtctttt
gaacagcctaaagtgaatcaatcacatgtaccacacatgggatcttattctaatcctcct
gagactggaagattctctgcatcaattgcgcctccttcttactctaagacagattctgga
tcaagatttaatgggccatctcctttaactggatcatatggtgatcagaagatggcatat
cacaacagcgggtcagatattcccaggccacctctaaattctaatgcctatgcccgtcct
cagccaatatatcagcagcctccttcaatgtacagtaacagaggaccaatagcaaaaaat
gaagctgccccaaggataatgcctatttctgctctgaacccttaccaaggtaggtggaca
ataaaggctcgagttacttcaaaaggagaacttagacactacaacaatcctcgtggtgac
gggaaagtattttcatttgatttactcgatgcttaccgtggagaaatacgagtaacatgc
ttcaatacagtagctgatcagttttacaaccaaattgaatctggtaaagtctacttcatt
tctaaaggaagcctgaaacctgctcaaaagaactttaaccatctcaaaaatgactatgaa
atatttcttgaaaacacatcaacaatccaaccttgctttgaggatgaccaatcaatcccc
cagcagcagtttcatttccatcagattggtgagattgaaggcatggacagcaacagtgtt
gtagatgtaattggtgttgtttcttccattaatcctgcaacttctttgatgagaaaaaat
ggtactgagactcagaagagatcccttcagttgaaagatatgtctggccgaagtgttgaa
ttgactctttgggggaacttctgtcaagcggaagggcaaagattgcaaaatatgtgtgac
tcggggttgttcccagttttggccgtgaaatctagtagagtaagcgacttcaatgggaag
gcagtgggaaccatttcaacaagtcagctctttatagagccagatttccccgaggctcat
tcactgagagagtggtttgaaagggaagggaggagtactctttctgtctctatatccagg
gaagttgctagtgtgggtaggacagatgtcaggaagaccatatctcaaattaaagatgag
aggttaggaacctctgagaagccagattggatcacggttagtgcaactgtttcatttatt
aaggttgacagtttctgctacacagcatgtcctatcatgatcggggaccgacaatgtagc
aaaaaagttacaaataatggagatggaaaatggagatgtgacaggtgtgatcagtctgtt
gacgaatgtgactacaggtacatactccagctgcaaatacaggatcatactggcttaact
tgggtaactgcctttcaagaaggtggtgaggagatcatgggcatacctgcaaaaagattg
tattatttgaagtatgaagagcaagatgatgagaaatttgcagaaatcatccggaaggtt
ctttttacaaaatttataatgaagttgaaaataaaggaagagacttttagtgatgaacag
agagtaagatcaacagtggtaaaagcagaaagcattaatttttcaagcgaatccaggttt
cttctaaatttgatggaaaaactcaagccagagaacagtagttctgctaccccaaaagca
gaaagcaccatacataatttcggttttcgtgacactgcttctgaaaatattggtggtgga
cagttcgtgtcacccattcgaaatagtaccaatttcagcagagaatatggtacacccaac
caaggtgttcagtatgggaaccagtacagtagctctaggccttctccatccacaccgctt
aactcgaacacatactgcaacagctgtgggggttctggccacagctcaacgaactgcccg
agtatcatgagtggtcctgcactgtctgttggaggtgggatgtattcaaatcaagcttct
ggcccttcgggtggtacctccggtgaatgcttcaaatgccatcaaactgggcattgggct
agggattgccctggcttggccaatgtccctccagcttatggtaaccgtggcttcacggct
aggtga
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