Cucumis sativus (cucumber): 101211367
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Entry
101211367 CDS
T02486
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16
KO
K14791
periodic tryptophan protein 1
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csv03009
]
101211367
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
90S particles
Other 90S particles
101211367
Pre-60S particles
Other pre-60S particles
101211367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_SCAP
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
WDR54
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
101211367
NCBI-ProteinID:
XP_004149077
UniProt:
A0A0A0LH54
LinkDB
All DBs
Position
2:4135350..4142346
Genome browser
AA seq
493 aa
AA seq
DB search
MISAVSWVPKGVCKPLPDLADPPSQETIDQLLKSNQVVEDSSKHSDDEADEEDMDVEDAN
DEEIANALAVAQALGKSSETRNLETKYDDIAEELKELDMDNYDNEDDEIELFTSGAGDVY
YPSNDMDPYLQDKDGDDSEDIEDETIKPTDAVIICACSEDNVSALQVWICEGYGVGDPNF
YIHRDIIIPAFPLCTAWLDCPLKGGERGNFIAVGSMEPSIEIWDLDVIDEVQPCAVLGGI
VEKKKKKKKGKKTSVTYKENSHTDSVLGLAWNKEFRNILASASADKQVKIWDVSTGQCNI
TMQHHIDKVQAVAWNHHSSQVLLSGSFDHSVVLKDGRNPSHSGYKWQVTADVENLAWDPH
TEHMFVVSLEDGTVKGFDIRNATTESSSESKASFTLHAHEKAVCSVSYSPSAPNLLATGS
TDKMVKLWDLSNNEPSCLASTNPKAGAVFSVSFSEDCPFLLAIGGSKGKLEVWDTLTDAA
VSRKYGNYSQQRS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgatatctgcggtttcatgggttcctaaaggggtctgtaagcctcttccagaccttgcc
gatcctccctcccaggagactattgatcaactcctcaagagcaaccaagtcgttgaggat
tctagtaaacatagtgatgatgaggcagatgaagaagatatggatgttgaagacgccaat
gatgaagagattgccaatgcactagctgttgcacaagcacttggaaaatcttctgagacc
aggaatctagaaaccaaatatgacgatattgctgaagagttgaaggaactcgacatggac
aattatgataatgaagatgatgagattgagctgtttacctctggagctggagacgtttac
tatccatctaacgacatggacccatatctccaggacaaggatggtgatgactctgaagat
attgaggatgaaaccatcaaaccgacagatgctgtcataatttgtgcatgtagtgaagac
aacgtcagtgctctccaggtatggatatgtgaaggatatggtgtaggtgatccaaacttc
tacattcaccgtgatataattattccagcatttcctctttgcacagcttggctagattgt
cctctgaagggtggagaaagagggaactttatcgcagttggttcgatggaaccttcgatc
gagatatgggaccttgacgttattgacgaggtgcaaccatgtgccgtgttaggtggaatt
gttgaaaagaagaagaagaagaagaagggaaagaaaacgtcagttacatacaaagagaac
agtcacacggattccgtacttggacttgcttggaacaaggaattcaggaatatacttgct
agtgcaagtgctgataagcaagtcaagatttgggacgtatctactggacaatgtaatata
actatgcagcatcatatagacaaggttcaagctgttgcatggaatcatcattcgtcacaa
gtactccttagtggatcttttgatcattcagtagttttgaaagatgggagaaatccttcc
cattcaggctacaagtggcaagttacagcagatgttgagaacttggcatgggatccgcat
acagagcacatgtttgtggtgagtctagaggatggtacagtgaaaggttttgatatccgg
aatgccactacagagagtagttctgaatccaaagctagttttactctccatgcgcatgag
aaagctgtttgctcagtttcttacagtccttcagcacctaatctacttgctactggatct
actgataaaatggttaaattatgggacttgtccaataatgagccttcatgtctggcatcc
accaatcctaaagctggagctgtgttttcggtttccttctcagaagattgcccctttttg
ctggctattggaggctccaagggaaaattggaggtttgggatacattaactgatgctgca
gtgtctcgaaagtatggaaattatagtcagcagagatcttaa
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