Cucumis sativus (cucumber): 101211398
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Entry
101211398 CDS
T02486
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04120
Ubiquitin mediated proteolysis
csv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101211398
04120 Ubiquitin mediated proteolysis
101211398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csv04121
]
101211398
Enzymes [BR:
csv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101211398
Ubiquitin system [BR:
csv04121
]
Ubiquitin ligases (E3)
U-box type E3
101211398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF1390
Motif
Other DBs
NCBI-GeneID:
101211398
NCBI-ProteinID:
XP_004136686
UniProt:
A0A0A0LCQ5
LinkDB
All DBs
Position
3:33580489..33589618
Genome browser
AA seq
1043 aa
AA seq
DB search
MATSKPQRSPEEVEDIILRKVFLISLTDTSDSDSRIVYLEQTAAELLSEGKPLRISRDVM
ERIIIDRLSAHVPSAEPPFQYLIGCYRRAHDETKKIASMKDKTLRSDMEIALKQAKKLTI
SYCRIHLGNPELFSSGADLGTNSNTSPLLPLIFSEVGGSSMDGFGASTSVGGAYQCPPGF
LEEFLRDSDFDTLEPILKGLYEDLRGSVLKVSALGNFQQPLRALRFLVSFPVGAKSLVNH
PWWIPTGKYSNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPADLLS
SFTTIKTVMNNLYDGLSEVLLSLLKNTETRENVLEYLAEVINRNSSRAHIQVDPLSCASS
GMFVNLSAIMLRLCEPFLDANLTKRDKIDPKYVCYSNRLELRGLTALHASSEEVTEWINN
GTQLRTDNPGQSSDSESRLLQSQEASSSGSNATIGSSTAKARSSSDKTRYPFICECFFMT
ARVLNLGLLKAFSDFKHLVQDISRCEDTLSTLKAMQGQGPAPQLEMDIARLEKEIELYSQ
EKLCYEAQILRDGTLIQQALTFYRLMVIWLVGLVGGFKMPLPSACPMEFASMPEHFVEDA
MELLIFASRIPKALDGINLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWIPRRSGSS
VTATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHR
NAWRMIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQE
RQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQL
VGPQRKSLSLKDPEKYEFRPRELLKQIVQIYVHLARGDTENIFPAAISKDGRSYNEQLFT
AAADVLIRRIREDSRIIQEFTDLGNKAKDAASEAMDAEATLGDIPDEFLDPIQYTLMKDP
VILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPNEELKARIKEFIRSQELKKQL
DGGVAMQSSKATIQPTSGEMLID
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcaaaaccccaaaggtcacctgaggaggtcgaagatatcatccttcgtaaa
gtcttcttaatttctctcacagatacctccgattctgattccagaatcgtctatctcgag
caaaccgccgccgaacttcttagcgaaggcaaaccattgaggatttcaagagatgtaatg
gagcgcatcataatcgatcgtctttctgcccatgtcccctccgccgaacccccttttcag
tacctaattgggtgctaccgtcgagctcacgacgagactaagaaaatcgcttccatgaag
gataagactttgcgctctgatatggaaattgctcttaagcaggccaagaagttgacgatt
tcgtattgtaggattcatttaggcaatcctgaattgttttcttccggtgccgatttaggt
actaactccaacacttcgcctttgcttcctttgattttctctgaggtcggtgggagctcc
atggatggatttggggctagtactagtgttggtggagcctatcagtgccctccgggtttc
ctggaggagtttctccgtgactcggattttgatacgttagaacccattttgaaggggttg
tatgaggatttaaggggtagtgtccttaaagtttctgctcttgggaacttccagcagccc
ttaagagcacttaggtttctggtcagctttcctgtcggtgctaaatctcttgtgaatcac
ccttggtggattcctactggtaaatattccaatgggcgtgtcattgagatgacaagcatt
ttggggcctttcttccatgtcagtgctctgcctgaccatgccatttttaagagccaacct
gatgttggccagcagtgcttttcagaagcatcaactcgtagaccagctgatttactatct
tcattcactacaattaaaacagtcatgaataacttatatgatggcctttcggaagttctt
ctctcccttcttaagaacacagagacccgtgaaaatgttcttgagtatctggcagaggtg
ataaatagaaactcatcaagggctcatatacaggttgatcctctctcctgtgcaagttcg
ggcatgtttgttaatctcagtgccatcatgctacgtctttgtgagccttttctagatgca
aacttgaccaaaagggataaaattgatccaaaatatgtatgttatagtaaccgattggag
ttgagaggattaactgctctacatgcttcatctgaagaagttaccgagtggattaataat
ggtactcagttgagaactgataaccctgggcagtccagcgacagtgaaagtcgcttgcta
caatcccaggaggcttccagttctggcagtaatgctactattggatcttctactgcaaaa
gcaagatcaagtagtgataaaactaggtacccgtttatatgtgagtgcttctttatgact
gcaagggtgctgaatttgggcttgttaaaagcattttcagacttcaagcatttagtacag
gatatatctaggtgtgaagatacattgtccacgcttaaagccatgcagggacaaggccct
gccccacagcttgaaatggatatagctcgccttgagaaggaaatagagttgtactcacag
gaaaaactttgttatgaagctcaaatactgagggatgggacactgatccagcaagctctt
actttctatcgattaatggtcatctggttagttggtttggttggtggatttaaaatgcct
cttccatcagcttgtccaatggaatttgcatccatgccagaacattttgtggaagatgct
atggaattgcttatatttgcttctcggattccaaaagctttggatggcatcaatttggat
gattttatgaacttcattattatgttcatggcaagtcccgaatatattagaaatccttac
ttaagagcaaagatggttgaagttctgaactgctggattcctcgtagaagtggttcatct
gtaacggcaacactatttgaaggccaccaactatcgcttgagtatcttgttaggaatctt
ttaaaactctatgtagacatcgagtttactggatcacatacacagttttatgacaagttt
aacatccgtcataatattgccgaacttctggaatacctttggcaggttcctagtcatcgc
aatgcttggagaatgattgccaaggaagaggagaagggtgtttacctgaatttcttgaac
ttcctaatcaacgatagcatatatcttcttgacgaaagccttaataagattcttgaactt
aaagagcttgaagctgaaatgtcaaatactgcagaatgggaacggcgacctgctcaagag
aggcaggaaagaactcggctctttcactcccaagaaaatatcatccgaatcgatatgaaa
ttagcaaatgaggacgtgagtatgctggcatttacttcagagcaaatcacagctcctttc
ctacttccagagatggttgaaagggtggccagcatgcttaattattttctcttgcaactt
gttggtcctcagcgaaaatctcttagtctgaaagaccctgaaaagtatgaattccgtcca
agagaattgcttaagcagattgttcaaatatatgttcatctggcaagaggggatacggag
aatattttcccagctgccatttcgaaggacggccgatcgtacaacgagcagttgttcact
gctgcagcagatgtacttattagacgtattagagaagatagtaggataatacaggagttt
actgatcttggtaacaaagccaaagatgcagcttctgaggcaatggatgctgaagctact
ctaggagatatacccgacgaattcctcgacccaatccaatacactttaatgaaggaccct
gtgatcttaccttcttcgaggatcaccgtcgacagacccgtcattcaaagacatctcctc
agcgacagtaccgacccattcaaccggtctcatctgaccgcggacatgctaataccaaat
gaagaactgaaagcaagaatcaaagaatttattaggtcacaagaactgaagaagcaacta
gatggaggggttgcaatgcagagcagcaaggcaaccattcaacccacaagtggagaaatg
ttgattgattaa
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integrated database retrieval system
