Cucumis sativus (cucumber): 101211446
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Entry
101211446 CDS
T02486
Symbol
CSPHR
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csv03400
]
101211446 (CSPHR)
Enzymes [BR:
csv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
101211446 (CSPHR)
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
101211446 (CSPHR)
Prokaryotic type
101211446 (CSPHR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-GeneID:
101211446
NCBI-ProteinID:
NP_001267582
UniProt:
Q9AVI6
LinkDB
All DBs
Position
5:2408054..2411275
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AA seq
489 aa
AA seq
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MASTLSNSVQPCRFRVLKDGTGSLGPVVYWMFRDQRVKDNWALIHAVDEANRANVPVAVA
FNLFDRFLGAKSRQLGFMLRGLQQLQHDIQETLQIPFFLFQGEAEQTIPNFIRECGASLL
VTDFSPLREVRKCKEEICKRVEESVKVHEVDAHNVVPTWVASEKLEYSAKTLRGKINKKL
PDYLIDYPSMVIPTRKWPSADKFIDWDRLIDDNLRKGADVPELEWCKPGEKAAMEVLMGS
KDGFLTKRLKGYAIDRNNPLKPKGLSGLSPYLHFGQISAQRCALEARSIRKLNPQAVDVF
LEELIVRRELADNYCYYQPHYDSLLGAWEWARKTLMDHASDKREYIYTREQLEKAQTADP
LWNAAQLEMAHHGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYEIDGRDPNGYVG
CMWSICGVHDQGWKERPVFGKIRYMNYAGCKRKFDVDGYIAYVKRLVGEIKKRKPEETLE
DRKPKGIRC
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaaccctctcgaattctgttcaaccgtgtcggtttcgggttctcaaagatgga
acgggttctcttggtccagtggtttattggatgttcagagatcaaagggttaaagacaat
tgggcgttgatacacgccgttgatgaagccaacagagccaatgtccctgttgctgttgcc
ttcaatttgttcgatcgatttttgggggcgaaatctcggcagttagggtttatgcttagg
gggctgcaacaacttcaacatgatattcaagaaacgcttcaaataccattcttcttgttt
cagggggaagctgaacagactataccaaatttcattagagaatgtggggcttcacttcta
gtcacagacttctcacccttgagagaagttcgaaagtgtaaagaagaaatttgtaagagg
gtagaggaatcagttaaagtacatgaagtcgatgcccacaatgtagtacctacttgggtt
gcatccgagaaattggagtacagtgcaaaaactttaagggggaagataaacaaaaagctc
ccggattaccttatagattacccttctatggtcataccaactagaaaatggccttccgct
gataagtttattgattgggatagacttattgatgataacttgaggaaaggagcagatgtt
cctgaacttgaatggtgtaaaccaggggaaaaggctgcaatggaagtattgatgggtagt
aaagatgggtttttgactaagaggttgaagggctatgcaattgataggaacaatccattg
aaacccaaggggctctctggcctctccccatatttgcattttgggcaaatatctgcacag
cgttgtgccttagaagcacgcagcattagaaaactcaatccacaggcagttgatgtgttt
cttgaggagttgattgttagaagggaacttgctgataattactgctactaccaacctcac
tatgattcactgctgggggcttgggaatgggcacgtaaaaccctgatggaccatgcttcc
gataagcgagaatatatttacacgagggagcaactggagaaggcgcaaactgctgaccca
ctatggaatgctgctcaactggagatggcccaccatggaaagatgcatggttttatgaga
atgtactgggcaaaaaagattttggagtggacaagaggacctgaggaagcccttgaaatc
tgcatatacttgaatgacaagtatgaaatagatgggagggatccgaatggatatgttggc
tgcatgtggtcaatctgcggtgttcacgaccagggttggaaagagcgaccggtatttggg
aagattcgatacatgaactatgctgggtgcaagaggaaatttgatgtggatggctacatt
gcctatgtgaagagactagtgggtgaaatcaagaaaagaaaaccagaggaaactctggag
gatagaaagccaaagggaattcggtgctag
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