KEGG   Cucumis sativus (cucumber): 101211650
Entry
101211650         CDS       T02486                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
csv  Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:csv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csv03009]
    101211650
Ribosome biogenesis [BR:csv03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    101211650
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st NBCH_WD40 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_Nup120_160 PQQ Beta-prop_WDR11_1st PEP5_VPS11_N
Other DBs
NCBI-GeneID: 101211650
NCBI-ProteinID: XP_011654344
UniProt: A0A0A0L0D5
LinkDB
Position
4:complement(5756999..5758321)
AA seq 440 aa
MPSSPQEVVLASSPDGPIVAYDASTGTHLASFNSSRSPRRGITRAGKSFIAVSHICPVTA
SGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNSLP
AHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVT
SIYSGMGISSTQIVSCSLDGRCKLWNLLSGTILHTVVFPCAIFSVVLEPSETEFFAAGSD
GLVYKGSLGHNNKRRRGTDYELIPQISNDLVYRRSLRHKNKHLTGTSSELIPWSTKHEAA
VVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERSHGKEQCV
KTDSHGGAMEISERFRLPIKMLGLSIKQTVEMQGEVGAAGSDVSRAIEMLESAIAVYEKM
LELILKEAKASYNQREETQG
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgccatcttctccacaagaagttgtccttgccagctctcctgatggacccattgttgcc
tatgatgcctccacaggcacccatctggccagcttcaacagtagccgttcgcctcgccgt
ggcattacccgagccgggaaaagtttcatagctgtttcccacatttgcccagtcactgct
tcgggctcgatccatatttacaattggtggacttcatctgccttccaatgcctaactgtc
cctgaacccgttgcccctctcacagccactcctgatggtttttatctgtttgctggtggc
ctttcaggctacatccatattctctctcttccatcaggggatgttctcaactctctacct
gcacacaaaaagccggtatcttgccttaaacttagtgccgatgggtcacttctcatttca
ggtggggatgatggcacaatcgttgtcatgccaatctttcaacttgtacaagccaaacca
cgagaaaatgcaaccgaacacattctgcatcagtttttagcacatactgattcagtaact
tccatttactcgggcatggggatatccagtacccaaatagtctcctgctcattggatggc
agatgcaaactttggaacttgctctcaggaaccatcttgcacaccgtggtattcccttgt
gccattttcagtgtggtcttagaaccatcagagacagaatttttcgctgcaggatctgat
ggcttggtgtacaagggatcgttgggacataacaacaaacgccgtaggggcacagactat
gaactaattccacaaatctccaatgacttagtgtataggcgctcattgaggcataaaaac
aaacacctaacaggcacgagctctgaactaattccatggtcgacaaagcacgaggctgca
gttgtttctatagtcatagtaaacgaaggaaagcacttaatatctgcagcagaagatggg
agcatctgggtctgggaagtgaagaaagggcaggtcataatggcccttgaaaatgagatg
ggaagcataagcgatttggtgatggccacagaaagaagccatggtaaagaacagtgtgtc
aaaacagacagccatggaggagcaatggaaatcagtgaaaggtttagattacccattaaa
atgttggggttgtcaataaaacaaacagttgaaatgcaaggcgaggtgggggcggccgga
agcgacgtgagtagagccattgagatgctggaatctgccattgctgtgtatgagaagatg
ttggaattaatcctcaaggaagccaaggcaagctacaatcaaagagaagaaacacaggga
tag

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