Cucumis sativus (cucumber): 101211713
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Entry
101211713 CDS
T02486
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101211713
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101211713
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101211713
NCBI-ProteinID:
XP_031739947
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All DBs
Position
4:complement(847266..849678)
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AA seq
342 aa
AA seq
DB search
MLVPSTKTFLLNPVQFQGPCMSSSVGVQILGKIVAPSDLDAWKVFDAKNWLLFSNVSRLV
IQGNGEIDGQGAAWWDRDSDGKPTALAIYDCDGLHLSGLTHSNSPQSHMHIVRCNHASIS
KLNIVAPENSPNTDGIDVAHSSHVKIHNCNIGTGDDCIAISEGTSNIHIANIQCGPGHGI
SIGSLGKDGTSSSVEDVRVQNCHLKGTMYGARIKTWQGGAGYARKISFQGITLDQVHKPI
LIDQYYCNGKTDCKNQVKTGKFNLYKTSAVEVSDVLYQGLHGTSATEVAVELSCSETVGC
RNIVLEDIDIRYADSDKIAQSSCDDAHGTSTNTFPAVDCLKP
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgctagtaccatctaccaagacatttttgctgaacccagtgcagtttcaaggcccatgc
atgtcctccagcgtcggtgttcaaatccttgggaaaatagtggctccaagtgaccttgat
gcttggaaagtctttgatgcgaaaaattggttgctgttctctaatgtgagcagacttgtc
atacaagggaatggtgaaattgatgggcaaggagctgcttggtgggaccgggattcagat
ggaaaacccacggcattggcaatttatgactgtgacggccttcacctttctggattaaca
cacagtaacagtccacagagccacatgcacatagttcgctgcaatcatgcttctatttct
aaactgaacatagtggcacctgagaatagtcccaacactgatggtattgatgtggcccat
tcgtctcatgttaagattcacaattgcaatattggaacaggtgatgattgcatcgctatt
agtgaaggcacttccaatattcacatagcaaacatccagtgtggacctggtcatggaata
agtattggtagcttgggaaaagatgggacgtcatcctctgtagaagatgtgagagttcaa
aattgtcacctgaaagggaccatgtacggagcaaggatcaaaacttggcagggaggagct
ggatatgcaaggaagatatcatttcaaggaattacactggatcaagttcacaaaccaatc
ctgatcgaccagtattactgtaatggaaaaacagactgcaaaaaccaggtaaaaacagga
aaatttaacttgtacaagacatcagctgtagaagtgagtgatgttttgtaccaaggattg
cacggaacgtctgcaacagaggtggcagtggaattaagttgcagtgaaactgtaggctgc
aggaacattgtattagaagatatcgatataagatatgcagattctgataagatagctcag
tcgtcgtgtgacgatgctcatggaacatcaacaaatacatttcctgccgtagattgcttg
aaaccatag
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