Cucumis sativus (cucumber): 101212157
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Entry
101212157 CDS
T02486
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 34 isoform X1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csv03400
]
101212157
Enzymes [BR:
csv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101212157
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
101212157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
RQC
ResIII
DUF7051
DUF4349
Motif
Other DBs
NCBI-GeneID:
101212157
NCBI-ProteinID:
XP_011651674
UniProt:
A0A0A0L974
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All DBs
Position
3:complement(25991430..26009572)
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AA seq
708 aa
AA seq
DB search
MNPEEVLEELLNVEVQINEVQAEINLLLERQDNLYQRKSELQSLLELCNETEDSVSQGTG
TSTNSENWSGSFKWDSEADDVKLNIFGISSYRANQREIVNAVMSGRDVLVIMAAGGGKSL
CYQLPALLYDGIALVVSPLLSLIQDQVMGLAALGISASMLTSATSKEDEKLIYKNLEKGE
GSMKILYVTPEKVSKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL
KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI
DQIAEFIQESYPNNESGIIYCFSRKECEQVAKELRLRGISADHYHADMDSVAREKVHMRW
SNSRLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYYRP
GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSVFFRHFAEPLKDCNGMCDLCAVAS
EVKEVDVCSHARVIISILQDVQKSNQKMTMLQLVDKLKTKHNGLVSDLRKEEIEQLIIQL
LLDRVLKEEFQHTAYATNAYVTVGPLARQVLQGKKVVKIEISGKQKVTGVKSKRKSVAPS
GLECKLDKLRKELASIDGGIFPHSVLSTQQIVVLSAQKPTSLDQLETMIGKVKAEKYGDR
ILEEIEKWSIGQNPNASEEEQEEDENRTPKRPKTIDTHVVIESSDEEA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgaagaggtattggaggagcttctcaacgtagaagtgcagataaacgaagtc
caagctgaaataaatctacttctggaacgccaagacaacttgtatcaaagaaagtcagag
ctgcagtctttgttagaactctgcaatgaaacggaagattccgttagccagggtacaggg
acttctacgaattcagaaaattggtctggttcatttaaatgggattctgaagcggatgac
gttaaattgaacatttttggcatatcctcatatcgtgcaaaccagcgagagattgtcaat
gctgtcatgagtgggagagatgttttggtgattatggctgctggaggtgggaagagtctt
tgttaccaactaccagctcttctatatgatggcattgctctggttgtcagtcctttgctt
tctttgattcaggatcaggttatgggtttggctgctttaggaatttcagcatctatgctt
acatcagcaactagtaaagaagacgagaagctcatatacaagaatcttgaaaagggtgaa
gggagtatgaaaatattatatgtcacaccagaaaaggtatcaaagagcaagagatttatg
tctaaacttgaaaagtgctatcatgctggtcgtctttctcttattgcaattgacgaggct
cattgctgtagtcagtggggccatgactttcgacctgactacaagaatcttggtattttg
aagactcagtttccaaatgctcctgtgattgctttgactgcaactgccactcagagggtc
caaaatgatctggttgagatgcttcgcatccccaaatatgttaaatttgtcagtacagtc
aatagaccgaatctcttttacatggtaagggaaaagtcatctgttagcaaggtggtgata
gatcaaatagctgaatttatacaagaatcttatcctaacaatgaatcagggataatatac
tgcttttcccgaaaggagtgcgagcaggttgcaaaggagttacgtctgaggggtatttct
gctgaccactatcatgctgatatggattctgttgcacgtgagaaagttcatatgcggtgg
agcaattctaggctgcaggtcattgttggcacggtggcctttggtatgggaatcaacaaa
ccggatgtcaggtttgttatccatcacagtctgagcaaatcaatggaaacatactatcag
gaaagtggacgagctggacgggatgggcttccatctgaatgcctactttactataggcct
ggtgatgtcccaagacaaagttcaatggtattttatgagaattctggattggagaatctc
tatggtattgttcaatattgtcagtctagaagacaatgtcgccgcagtgtctttttccga
cattttgctgagccactgaaagattgcaatgggatgtgtgatttgtgcgcagttgccagc
gaggttaaagaagtggatgtctgtagtcatgctagagttattatttcaatcttacaagat
gtacagaagagcaaccagaagatgacgatgttgcagttagtagacaaattgaaaacaaaa
cacaatggtctagtttctgacctgaggaaagaggaaatagagcaacttatcatacaactt
ttattagatcgtgttttgaaagaagaatttcagcatacagcttatgctactaatgcgtat
gttaccgttgggccattggctcggcaagtattgcaagggaagaaggtcgtgaaaattgag
atttccggcaaacaaaaggtaactggtgttaaatctaaaagaaaaagtgttgctccatca
ggtttagagtgtaagcttgacaagctacgcaaggaacttgcatccatcgacggaggcata
ttccctcattcagtgctctcgacccagcaaatcgttgtcttaagtgcccaaaagcctact
tccttggatcagttggaaacaatgattggaaaagtgaaggcagagaagtatggggataga
attctggaggaaatagaaaaatggtccattggtcaaaatccaaatgcttccgaagaagag
caagaagaagatgaaaataggactccaaaaagaccaaaaaccattgacactcacgttgtt
attgagagcagcgatgaagaagcctga
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