Cucumis sativus (cucumber): 101212197
Help
Entry
101212197 CDS
T02486
Name
(RefSeq) phytochrome B
KO
K12121
phytochrome B
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101212197
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_4
HisKA
PAS_9
PAS_8
PAS_3
DUF1425
Motif
Other DBs
NCBI-GeneID:
101212197
NCBI-ProteinID:
XP_004134246
UniProt:
A0A0A0L825
LinkDB
All DBs
Position
3
Genome browser
AA seq
1132 aa
AA seq
DB search
MVSSNRATHSHQQQAQSSNTNTSNLRSHRTDSISKAIAQYTVDARLHAVFEQSGESGKSF
DYSQSIKTSTQSVPEQQITAYLSKIQRGGHIQPFGCMIAIEEASFRVIAYSENARELLGL
TPQSVPSLEKPEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWIHSKNSGKPFYA
ILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVES
VRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRM
IVDCHASPVRVIQDAGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVINGNDDE
AIGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLR
TQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEWL
LAFHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITKKDFLFWFRSHTAKEIKWGGA
KHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKNDVAINS
KAVVHPHLGDLDLQGIDELSSVAREMVRLIETATAPIFAVDADGRINGWNAKIAELTGLA
VEEAMGKSLVRDLVYKESEETVDRLVSRALKGEEDKNIEIKMRTFGPEEDQRTPFFVVVN
ACSSRDYTDNIVGVCFVGQDVTCQKVFMDKFVSIQGDYKAIIHSPNPLIPPIFASDDNTC
CSEWNTAMEKLTGWSREDIIGKMLVGEVFGSCCRLKGPDALTKFMIVLHSAIGGQDNEKY
PFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFLQIASPELQQTLRMQRQQEKNRFARM
KELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVACEKQMLKIIEDMDLECID
DGTMELEKGEFLLGSVINAVVSQVMILLRERSLQLIRDIPEEVKTMAVYGDQVRIQQVLA
DFLLNMVRYAPSPEGWVEIRVCPLLKQNSDGITLAHTEFRIVCPGEGLPPELVQDMFHSG
RWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLITLELPLTERGLNDVG
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggtttccagtaatcgagcaactcattcgcatcaacaacaagcgcagtcttcgaacacg
aataccagcaatttgcgatctcatcgtacagattccatcagcaaagctatagcgcagtac
acagttgatgctcgtcttcacgcggtgttcgagcagtcaggtgagtctggaaaatctttt
gactactcacaatctataaaaacttcgactcaatctgtgccggagcagcaaattactgct
tatttgtcgaagattcaaaggggtggtcatatccagccctttggatgtatgatagctatt
gaagaggctagttttcgagttattgcgtacagtgaaaacgctagggaattgctcggtctg
acgcctcaatcagtgccgagtcttgaaaagcctgagatccttacaattgggactgatgta
cgcaacttgttcacttccaatagtgcaattctactagagaaggcgtttggggctcgagaa
atcactttgttgaacccagtttggattcattccaagaattctgggaagcccttctacgca
attttgcataggattgatgtgggaattgtgattgatttggagcctgcaagaacggaggat
cctgctctttctattgctggagcagtacaatcgcagaagcttgcggtacgtgcaatttct
cagttacaagcactccctggcggagatattaaactgttgtgtgatactgtggttgagagt
gttagggagcttactgggtatgatagagttatggtgtacaagtttcatgaggatgagcat
ggtgaggttgtagctgaaagtaagaggcctgacttagagccatacattggattgcattat
ccttctactgatattcctcaggcatcaaggtttttgtttaagcaaaaccgcgttaggatg
attgttgattgccatgcctctccagttcgtgtaattcaggatgcagggcttatgcaacat
ctctgcttggtgggttcaactcttcgtgcaccccatggttgccatgcccagtatatggcc
aatatgggctctattgcttcgttagcaatggcagttgttatcaacggtaatgatgatgaa
gctattggtggacgaaactcaacaaggctttggggtttggttgtatgtcatcatacttct
gctcggtgcattccgttcccactccggtatgcgtgtgagtttctaatgcaagcctttggg
cttcaactgaatatggaattgcagttggcctcacagttgtctgagaaacatgttttgagg
actcaaactctcttgtgtgacatgcttcttcgtgattccccagctggcattgttactcag
agtccaagcatcatggacctagtaaagtgtgatggggcagctctttactatcaagggaaa
tattaccctctgggtgtgacgccaactgaggcccaaataaaggatattgtggagtggttg
ttggctttccatggagattcaactggtttaagtacagatagcttggctgatgctggatat
ccaggggcagccttgctgggtgatgcagtttgtggaatggctgttgcttacatcaccaaa
aaggattttctattttggttccgatctcatacagcaaaagagatcaaatggggtggtgca
aagcatcatccggaggataaggatgatggtcaaagaatgcatccgcgttcttcattcaag
gcattcttggaagtggtaaaatcccgtagtttaccatgggagaacgcagaaatggatgca
attcactcattgcagcttattctacgtgattcatttaagaacgatgtggcaatcaattca
aaggcagttgtgcaccctcatctaggggatcttgacttgcaggggattgatgagctcagc
tcggttgcaagagaaatggtcaggttgattgagactgcaactgctcctatctttgctgta
gatgctgatggtcgtatcaatggatggaatgctaagatagctgagttgactgggcttgcg
gttgaggaggctatggggaaatccttggttcgtgatcttgtgtacaaagagtctgaagaa
acagttgacagacttgtttcccgtgctttaaaaggtgaagaagataaaaatatagagata
aaaatgaggacatttgggccagaagaagatcaaaggacgccattttttgttgtcgtaaat
gcttgctctagcagggactacactgataatatagttggcgtttgttttgttggtcaagat
gttacctgccaaaaagtgttcatggacaaatttgtaagcatacaaggtgattataaagca
attattcatagcccaaatcctcttatccctccaatatttgcttcagacgacaatacatgt
tgctcggaatggaatactgccatggaaaagctcactggatggtccagagaggacataatt
ggaaaaatgctagtaggagaggtttttggaagttgttgtcgactgaagggtccagatgca
ttgaccaaatttatgattgtcctgcacagtgcaattggagggcaggataatgaaaaatac
cccttttctttttatgacaaaaaggggaaatatgtgcaagctctcttaacagcaaataag
aggatgaatatggagggtcagattgttggagctttctgcttcttacagatagcaagtcca
gaattgcaacaaactcttagaatgcagaggcaacaggagaagaaccggtttgcaaggatg
aaagagctggcttacatttgccaggaagtgaagagtcctttgagtggtatacgctttact
aactcacttttggaggctacagatttgagtgaagatcaaaagcagttccttgagaccagt
gttgcttgtgaaaaacaaatgctaaagattattgaggatatggacttggagtgtattgat
gatggcacaatggagcttgagaagggggagttcttattgggaagtgttattaatgctgtt
gttagtcaagtgatgatactactcagagaaagaagcttacaactgattcgtgatatacca
gaagaagtaaagaccatggctgtctatggcgatcaagtgaggattcaacaggtcttagcc
gatttcttgttgaatatggtccgttacgcaccctctccggaaggctgggtagaaatacgt
gtctgtccattactgaagcaaaactcagatggaattactcttgcacacactgaattcagg
attgtatgccctggggaaggtctacctcctgagttagttcaggacatgtttcatagtggc
agatgggtgactcaagaaggattaggcttgagcatgtgcagaaagattctgaagctcatg
aatggtgaagtacaatacatcagggaatctgaaagatgctatttcttgattactctcgaa
ctccccttgacagagagaggcctaaacgatgtcggttag
DBGET
integrated database retrieval system
